Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33043 | 99352;99353;99354 | chr2:178538702;178538701;178538700 | chr2:179403429;179403428;179403427 |
N2AB | 31402 | 94429;94430;94431 | chr2:178538702;178538701;178538700 | chr2:179403429;179403428;179403427 |
N2A | 30475 | 91648;91649;91650 | chr2:178538702;178538701;178538700 | chr2:179403429;179403428;179403427 |
N2B | 23978 | 72157;72158;72159 | chr2:178538702;178538701;178538700 | chr2:179403429;179403428;179403427 |
Novex-1 | 24103 | 72532;72533;72534 | chr2:178538702;178538701;178538700 | chr2:179403429;179403428;179403427 |
Novex-2 | 24170 | 72733;72734;72735 | chr2:178538702;178538701;178538700 | chr2:179403429;179403428;179403427 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.896 | N | 0.638 | 0.135 | 0.200317383148 | gnomAD-4.0.0 | 2.73688E-06 | None | None | None | None | N | None | 0 | 4.47227E-05 | None | 0 | 0 | None | 0 | 0 | 1.79899E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0722 | likely_benign | 0.073 | benign | -0.179 | Destabilizing | 0.132 | N | 0.32 | neutral | None | None | None | None | N |
S/C | 0.1348 | likely_benign | 0.1492 | benign | -0.369 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | N | 0.500869025 | None | None | N |
S/D | 0.617 | likely_pathogenic | 0.5294 | ambiguous | -0.017 | Destabilizing | 0.919 | D | 0.621 | neutral | None | None | None | None | N |
S/E | 0.7241 | likely_pathogenic | 0.6601 | pathogenic | -0.122 | Destabilizing | 0.919 | D | 0.625 | neutral | None | None | None | None | N |
S/F | 0.2178 | likely_benign | 0.2234 | benign | -0.925 | Destabilizing | 0.988 | D | 0.68 | prob.neutral | None | None | None | None | N |
S/G | 0.0911 | likely_benign | 0.0917 | benign | -0.225 | Destabilizing | 0.896 | D | 0.638 | neutral | N | 0.456851553 | None | None | N |
S/H | 0.4659 | ambiguous | 0.4508 | ambiguous | -0.497 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
S/I | 0.1517 | likely_benign | 0.1536 | benign | -0.189 | Destabilizing | 0.968 | D | 0.66 | neutral | N | 0.509515389 | None | None | N |
S/K | 0.7973 | likely_pathogenic | 0.7573 | pathogenic | -0.387 | Destabilizing | 0.919 | D | 0.623 | neutral | None | None | None | None | N |
S/L | 0.0904 | likely_benign | 0.0907 | benign | -0.189 | Destabilizing | 0.851 | D | 0.591 | neutral | None | None | None | None | N |
S/M | 0.1632 | likely_benign | 0.1704 | benign | -0.204 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
S/N | 0.144 | likely_benign | 0.1333 | benign | -0.113 | Destabilizing | 0.896 | D | 0.623 | neutral | N | 0.444405118 | None | None | N |
S/P | 0.1735 | likely_benign | 0.1686 | benign | -0.162 | Destabilizing | 0.988 | D | 0.693 | prob.neutral | None | None | None | None | N |
S/Q | 0.603 | likely_pathogenic | 0.5912 | pathogenic | -0.339 | Destabilizing | 0.988 | D | 0.654 | neutral | None | None | None | None | N |
S/R | 0.7727 | likely_pathogenic | 0.7392 | pathogenic | -0.099 | Destabilizing | 0.968 | D | 0.687 | prob.neutral | N | 0.489852193 | None | None | N |
S/T | 0.0635 | likely_benign | 0.0657 | benign | -0.227 | Destabilizing | 0.103 | N | 0.407 | neutral | N | 0.46385767 | None | None | N |
S/V | 0.1481 | likely_benign | 0.1536 | benign | -0.162 | Destabilizing | 0.851 | D | 0.584 | neutral | None | None | None | None | N |
S/W | 0.4934 | ambiguous | 0.5215 | ambiguous | -1.016 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
S/Y | 0.2572 | likely_benign | 0.2582 | benign | -0.695 | Destabilizing | 0.996 | D | 0.68 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.