Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33051 | 99376;99377;99378 | chr2:178538678;178538677;178538676 | chr2:179403405;179403404;179403403 |
N2AB | 31410 | 94453;94454;94455 | chr2:178538678;178538677;178538676 | chr2:179403405;179403404;179403403 |
N2A | 30483 | 91672;91673;91674 | chr2:178538678;178538677;178538676 | chr2:179403405;179403404;179403403 |
N2B | 23986 | 72181;72182;72183 | chr2:178538678;178538677;178538676 | chr2:179403405;179403404;179403403 |
Novex-1 | 24111 | 72556;72557;72558 | chr2:178538678;178538677;178538676 | chr2:179403405;179403404;179403403 |
Novex-2 | 24178 | 72757;72758;72759 | chr2:178538678;178538677;178538676 | chr2:179403405;179403404;179403403 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs144319649 | 0.488 | 0.334 | N | 0.557 | 0.178 | None | gnomAD-2.1.1 | 2.81E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.89451E-04 | None | 0 | None | 0 | 0 | 0 |
E/K | rs144319649 | 0.488 | 0.334 | N | 0.557 | 0.178 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 3.85208E-04 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs144319649 | 0.488 | 0.334 | N | 0.557 | 0.178 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 1E-03 | 0 | None | None | None | 0 | None |
E/K | rs144319649 | 0.488 | 0.334 | N | 0.557 | 0.178 | None | gnomAD-4.0.0 | 1.54916E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.67977E-04 | None | 0 | 0 | 2.54293E-06 | 0 | 1.60067E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1754 | likely_benign | 0.2068 | benign | -0.223 | Destabilizing | 0.334 | N | 0.582 | neutral | N | 0.459894645 | None | None | N |
E/C | 0.7164 | likely_pathogenic | 0.8268 | pathogenic | -0.376 | Destabilizing | 0.982 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/D | 0.0594 | likely_benign | 0.0698 | benign | -0.342 | Destabilizing | 0.001 | N | 0.196 | neutral | N | 0.455622189 | None | None | N |
E/F | 0.6056 | likely_pathogenic | 0.7135 | pathogenic | 0.034 | Stabilizing | 0.982 | D | 0.671 | neutral | None | None | None | None | N |
E/G | 0.1629 | likely_benign | 0.1893 | benign | -0.41 | Destabilizing | 0.334 | N | 0.495 | neutral | N | 0.445522625 | None | None | N |
E/H | 0.4332 | ambiguous | 0.5222 | ambiguous | 0.572 | Stabilizing | 0.947 | D | 0.643 | neutral | None | None | None | None | N |
E/I | 0.2867 | likely_benign | 0.3784 | ambiguous | 0.238 | Stabilizing | 0.826 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/K | 0.2754 | likely_benign | 0.2956 | benign | 0.265 | Stabilizing | 0.334 | N | 0.557 | neutral | N | 0.467916696 | None | None | N |
E/L | 0.3292 | likely_benign | 0.4207 | ambiguous | 0.238 | Stabilizing | 0.7 | D | 0.667 | neutral | None | None | None | None | N |
E/M | 0.4268 | ambiguous | 0.5 | ambiguous | 0.003 | Stabilizing | 0.982 | D | 0.645 | neutral | None | None | None | None | N |
E/N | 0.1386 | likely_benign | 0.1838 | benign | -0.208 | Destabilizing | 0.539 | D | 0.592 | neutral | None | None | None | None | N |
E/P | 0.7888 | likely_pathogenic | 0.8522 | pathogenic | 0.104 | Stabilizing | 0.826 | D | 0.626 | neutral | None | None | None | None | N |
E/Q | 0.186 | likely_benign | 0.1986 | benign | -0.14 | Destabilizing | 0.638 | D | 0.587 | neutral | N | 0.440020805 | None | None | N |
E/R | 0.4035 | ambiguous | 0.4519 | ambiguous | 0.631 | Stabilizing | 0.7 | D | 0.638 | neutral | None | None | None | None | N |
E/S | 0.1661 | likely_benign | 0.2059 | benign | -0.341 | Destabilizing | 0.25 | N | 0.555 | neutral | None | None | None | None | N |
E/T | 0.1986 | likely_benign | 0.2396 | benign | -0.174 | Destabilizing | 0.7 | D | 0.574 | neutral | None | None | None | None | N |
E/V | 0.1794 | likely_benign | 0.2228 | benign | 0.104 | Stabilizing | 0.781 | D | 0.623 | neutral | N | 0.429091735 | None | None | N |
E/W | 0.8524 | likely_pathogenic | 0.9066 | pathogenic | 0.19 | Stabilizing | 0.982 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/Y | 0.4159 | ambiguous | 0.543 | ambiguous | 0.277 | Stabilizing | 0.982 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.