Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3305199376;99377;99378 chr2:178538678;178538677;178538676chr2:179403405;179403404;179403403
N2AB3141094453;94454;94455 chr2:178538678;178538677;178538676chr2:179403405;179403404;179403403
N2A3048391672;91673;91674 chr2:178538678;178538677;178538676chr2:179403405;179403404;179403403
N2B2398672181;72182;72183 chr2:178538678;178538677;178538676chr2:179403405;179403404;179403403
Novex-12411172556;72557;72558 chr2:178538678;178538677;178538676chr2:179403405;179403404;179403403
Novex-22417872757;72758;72759 chr2:178538678;178538677;178538676chr2:179403405;179403404;179403403
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Fn3-129
  • Domain position: 54
  • Structural Position: 72
  • Q(SASA): 0.77
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/K rs144319649 0.488 0.334 N 0.557 0.178 None gnomAD-2.1.1 2.81E-05 None None None None N None 0 0 None 0 3.89451E-04 None 0 None 0 0 0
E/K rs144319649 0.488 0.334 N 0.557 0.178 None gnomAD-3.1.2 1.97E-05 None None None None N None 0 0 0 0 3.85208E-04 None 0 0 1.47E-05 0 0
E/K rs144319649 0.488 0.334 N 0.557 0.178 None 1000 genomes 1.99681E-04 None None None None N None 0 0 None None 1E-03 0 None None None 0 None
E/K rs144319649 0.488 0.334 N 0.557 0.178 None gnomAD-4.0.0 1.54916E-05 None None None None N None 0 0 None 0 4.67977E-04 None 0 0 2.54293E-06 0 1.60067E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.1754 likely_benign 0.2068 benign -0.223 Destabilizing 0.334 N 0.582 neutral N 0.459894645 None None N
E/C 0.7164 likely_pathogenic 0.8268 pathogenic -0.376 Destabilizing 0.982 D 0.726 prob.delet. None None None None N
E/D 0.0594 likely_benign 0.0698 benign -0.342 Destabilizing 0.001 N 0.196 neutral N 0.455622189 None None N
E/F 0.6056 likely_pathogenic 0.7135 pathogenic 0.034 Stabilizing 0.982 D 0.671 neutral None None None None N
E/G 0.1629 likely_benign 0.1893 benign -0.41 Destabilizing 0.334 N 0.495 neutral N 0.445522625 None None N
E/H 0.4332 ambiguous 0.5222 ambiguous 0.572 Stabilizing 0.947 D 0.643 neutral None None None None N
E/I 0.2867 likely_benign 0.3784 ambiguous 0.238 Stabilizing 0.826 D 0.683 prob.neutral None None None None N
E/K 0.2754 likely_benign 0.2956 benign 0.265 Stabilizing 0.334 N 0.557 neutral N 0.467916696 None None N
E/L 0.3292 likely_benign 0.4207 ambiguous 0.238 Stabilizing 0.7 D 0.667 neutral None None None None N
E/M 0.4268 ambiguous 0.5 ambiguous 0.003 Stabilizing 0.982 D 0.645 neutral None None None None N
E/N 0.1386 likely_benign 0.1838 benign -0.208 Destabilizing 0.539 D 0.592 neutral None None None None N
E/P 0.7888 likely_pathogenic 0.8522 pathogenic 0.104 Stabilizing 0.826 D 0.626 neutral None None None None N
E/Q 0.186 likely_benign 0.1986 benign -0.14 Destabilizing 0.638 D 0.587 neutral N 0.440020805 None None N
E/R 0.4035 ambiguous 0.4519 ambiguous 0.631 Stabilizing 0.7 D 0.638 neutral None None None None N
E/S 0.1661 likely_benign 0.2059 benign -0.341 Destabilizing 0.25 N 0.555 neutral None None None None N
E/T 0.1986 likely_benign 0.2396 benign -0.174 Destabilizing 0.7 D 0.574 neutral None None None None N
E/V 0.1794 likely_benign 0.2228 benign 0.104 Stabilizing 0.781 D 0.623 neutral N 0.429091735 None None N
E/W 0.8524 likely_pathogenic 0.9066 pathogenic 0.19 Stabilizing 0.982 D 0.73 prob.delet. None None None None N
E/Y 0.4159 ambiguous 0.543 ambiguous 0.277 Stabilizing 0.982 D 0.643 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.