Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33052 | 99379;99380;99381 | chr2:178538675;178538674;178538673 | chr2:179403402;179403401;179403400 |
N2AB | 31411 | 94456;94457;94458 | chr2:178538675;178538674;178538673 | chr2:179403402;179403401;179403400 |
N2A | 30484 | 91675;91676;91677 | chr2:178538675;178538674;178538673 | chr2:179403402;179403401;179403400 |
N2B | 23987 | 72184;72185;72186 | chr2:178538675;178538674;178538673 | chr2:179403402;179403401;179403400 |
Novex-1 | 24112 | 72559;72560;72561 | chr2:178538675;178538674;178538673 | chr2:179403402;179403401;179403400 |
Novex-2 | 24179 | 72760;72761;72762 | chr2:178538675;178538674;178538673 | chr2:179403402;179403401;179403400 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs758109676 | -1.13 | 1.0 | N | 0.785 | 0.306 | 0.420939154896 | gnomAD-2.1.1 | 3.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.96091E-04 | None | 0 | 1.56E-05 | 1.40174E-04 |
R/C | rs758109676 | -1.13 | 1.0 | N | 0.785 | 0.306 | 0.420939154896 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/C | rs758109676 | -1.13 | 1.0 | N | 0.785 | 0.306 | 0.420939154896 | gnomAD-4.0.0 | 2.72693E-05 | None | None | None | None | N | None | 0 | 1.667E-05 | None | 0 | 0 | None | 0 | 0 | 2.54293E-05 | 1.31767E-04 | 1.60128E-05 |
R/H | rs72648276 | -1.85 | 1.0 | N | 0.656 | 0.259 | None | gnomAD-2.1.1 | 4.64E-05 | None | None | None | None | N | None | 8.27E-05 | 5.65E-05 | None | 0 | 0 | None | 1.96091E-04 | None | 0 | 1.56E-05 | 1.40174E-04 |
R/H | rs72648276 | -1.85 | 1.0 | N | 0.656 | 0.259 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/H | rs72648276 | -1.85 | 1.0 | N | 0.656 | 0.259 | None | gnomAD-4.0.0 | 1.92113E-05 | None | None | None | None | N | None | 5.34074E-05 | 5E-05 | None | 0 | 0 | None | 0 | 0 | 9.32415E-06 | 1.31749E-04 | 1.60128E-05 |
R/P | rs72648276 | -0.624 | 0.999 | N | 0.784 | 0.356 | 0.37953744168 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
R/P | rs72648276 | -0.624 | 0.999 | N | 0.784 | 0.356 | 0.37953744168 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/P | rs72648276 | -0.624 | 0.999 | N | 0.784 | 0.356 | 0.37953744168 | gnomAD-4.0.0 | 3.0986E-06 | None | None | None | None | N | None | 2.67037E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.29374E-05 | 0 |
R/S | None | None | 0.996 | N | 0.695 | 0.315 | 0.366848117066 | gnomAD-4.0.0 | 6.84235E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99507E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7373 | likely_pathogenic | 0.7048 | pathogenic | -0.461 | Destabilizing | 0.953 | D | 0.531 | neutral | None | None | None | None | N |
R/C | 0.3298 | likely_benign | 0.2856 | benign | -0.542 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.470082246 | None | None | N |
R/D | 0.9549 | likely_pathogenic | 0.9509 | pathogenic | -0.028 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
R/E | 0.7406 | likely_pathogenic | 0.7084 | pathogenic | 0.126 | Stabilizing | 0.992 | D | 0.589 | neutral | None | None | None | None | N |
R/F | 0.9043 | likely_pathogenic | 0.8852 | pathogenic | -0.187 | Destabilizing | 0.986 | D | 0.797 | deleterious | None | None | None | None | N |
R/G | 0.7009 | likely_pathogenic | 0.6622 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.43753786 | None | None | N |
R/H | 0.2829 | likely_benign | 0.2794 | benign | -1.149 | Destabilizing | 1.0 | D | 0.656 | neutral | N | 0.478099191 | None | None | N |
R/I | 0.5504 | ambiguous | 0.4769 | ambiguous | 0.369 | Stabilizing | 0.973 | D | 0.724 | prob.delet. | None | None | None | None | N |
R/K | 0.1641 | likely_benign | 0.1638 | benign | -0.339 | Destabilizing | 0.944 | D | 0.476 | neutral | None | None | None | None | N |
R/L | 0.461 | ambiguous | 0.4117 | ambiguous | 0.369 | Stabilizing | 0.109 | N | 0.467 | neutral | N | 0.403620075 | None | None | N |
R/M | 0.5907 | likely_pathogenic | 0.5255 | ambiguous | -0.262 | Destabilizing | 0.986 | D | 0.753 | deleterious | None | None | None | None | N |
R/N | 0.8735 | likely_pathogenic | 0.8654 | pathogenic | -0.184 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | N |
R/P | 0.5588 | ambiguous | 0.5551 | ambiguous | 0.113 | Stabilizing | 0.999 | D | 0.784 | deleterious | N | 0.384879598 | None | None | N |
R/Q | 0.2187 | likely_benign | 0.2025 | benign | -0.173 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | N |
R/S | 0.9045 | likely_pathogenic | 0.8902 | pathogenic | -0.747 | Destabilizing | 0.996 | D | 0.695 | prob.neutral | N | 0.441175598 | None | None | N |
R/T | 0.7049 | likely_pathogenic | 0.6587 | pathogenic | -0.402 | Destabilizing | 0.976 | D | 0.683 | prob.neutral | None | None | None | None | N |
R/V | 0.6428 | likely_pathogenic | 0.5979 | pathogenic | 0.113 | Stabilizing | 0.91 | D | 0.706 | prob.neutral | None | None | None | None | N |
R/W | 0.5494 | ambiguous | 0.5146 | ambiguous | 0.007 | Stabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
R/Y | 0.7593 | likely_pathogenic | 0.7326 | pathogenic | 0.301 | Stabilizing | 0.993 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.