Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33054 | 99385;99386;99387 | chr2:178538669;178538668;178538667 | chr2:179403396;179403395;179403394 |
N2AB | 31413 | 94462;94463;94464 | chr2:178538669;178538668;178538667 | chr2:179403396;179403395;179403394 |
N2A | 30486 | 91681;91682;91683 | chr2:178538669;178538668;178538667 | chr2:179403396;179403395;179403394 |
N2B | 23989 | 72190;72191;72192 | chr2:178538669;178538668;178538667 | chr2:179403396;179403395;179403394 |
Novex-1 | 24114 | 72565;72566;72567 | chr2:178538669;178538668;178538667 | chr2:179403396;179403395;179403394 |
Novex-2 | 24181 | 72766;72767;72768 | chr2:178538669;178538668;178538667 | chr2:179403396;179403395;179403394 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1553507202 | None | 0.957 | N | 0.281 | 0.171 | 0.315314060047 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | rs1553507202 | None | 0.957 | N | 0.281 | 0.171 | 0.315314060047 | gnomAD-4.0.0 | 6.5722E-06 | None | None | None | None | N | None | 2.41359E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3567 | ambiguous | 0.402 | ambiguous | -0.003 | Destabilizing | 0.997 | D | 0.605 | neutral | None | None | None | None | N |
K/C | 0.7531 | likely_pathogenic | 0.7951 | pathogenic | -0.246 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
K/D | 0.6226 | likely_pathogenic | 0.6644 | pathogenic | 0.074 | Stabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/E | 0.2311 | likely_benign | 0.2426 | benign | 0.112 | Stabilizing | 0.992 | D | 0.539 | neutral | N | 0.479651055 | None | None | N |
K/F | 0.8201 | likely_pathogenic | 0.8575 | pathogenic | -0.04 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/G | 0.4328 | ambiguous | 0.4872 | ambiguous | -0.241 | Destabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | N |
K/H | 0.3584 | ambiguous | 0.4096 | ambiguous | -0.416 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/I | 0.4604 | ambiguous | 0.5071 | ambiguous | 0.559 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/L | 0.3972 | ambiguous | 0.4491 | ambiguous | 0.559 | Stabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | N |
K/M | 0.3254 | likely_benign | 0.3565 | ambiguous | 0.157 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.470839033 | None | None | N |
K/N | 0.4669 | ambiguous | 0.5025 | ambiguous | 0.133 | Stabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.489217474 | None | None | N |
K/P | 0.5251 | ambiguous | 0.5776 | pathogenic | 0.401 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/Q | 0.1574 | likely_benign | 0.1715 | benign | 0.031 | Stabilizing | 0.957 | D | 0.281 | neutral | N | 0.495450013 | None | None | N |
K/R | 0.0862 | likely_benign | 0.093 | benign | -0.083 | Destabilizing | 0.996 | D | 0.561 | neutral | N | 0.47936584 | None | None | N |
K/S | 0.4295 | ambiguous | 0.4645 | ambiguous | -0.341 | Destabilizing | 0.997 | D | 0.606 | neutral | None | None | None | None | N |
K/T | 0.1873 | likely_benign | 0.2007 | benign | -0.143 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.461179937 | None | None | N |
K/V | 0.4098 | ambiguous | 0.4586 | ambiguous | 0.401 | Stabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
K/W | 0.7885 | likely_pathogenic | 0.8338 | pathogenic | -0.064 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
K/Y | 0.733 | likely_pathogenic | 0.7757 | pathogenic | 0.267 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.