Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33060 | 99403;99404;99405 | chr2:178538651;178538650;178538649 | chr2:179403378;179403377;179403376 |
N2AB | 31419 | 94480;94481;94482 | chr2:178538651;178538650;178538649 | chr2:179403378;179403377;179403376 |
N2A | 30492 | 91699;91700;91701 | chr2:178538651;178538650;178538649 | chr2:179403378;179403377;179403376 |
N2B | 23995 | 72208;72209;72210 | chr2:178538651;178538650;178538649 | chr2:179403378;179403377;179403376 |
Novex-1 | 24120 | 72583;72584;72585 | chr2:178538651;178538650;178538649 | chr2:179403378;179403377;179403376 |
Novex-2 | 24187 | 72784;72785;72786 | chr2:178538651;178538650;178538649 | chr2:179403378;179403377;179403376 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | None | None | 0.317 | N | 0.765 | 0.549 | 0.818101870621 | gnomAD-4.0.0 | 6.84226E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99502E-07 | 0 | 0 |
I/L | rs142108986 | 0.014 | 0.002 | N | 0.43 | 0.073 | 0.163833314356 | gnomAD-2.1.1 | 1.78E-05 | None | None | None | None | N | None | 2.06748E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/L | rs142108986 | 0.014 | 0.002 | N | 0.43 | 0.073 | 0.163833314356 | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 1.93013E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/L | rs142108986 | 0.014 | 0.002 | N | 0.43 | 0.073 | 0.163833314356 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
I/L | rs142108986 | 0.014 | 0.002 | N | 0.43 | 0.073 | 0.163833314356 | gnomAD-4.0.0 | 1.17735E-05 | None | None | None | None | N | None | 2.39872E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60061E-05 |
I/R | rs763888823 | None | 0.484 | D | 0.791 | 0.583 | 0.834966523412 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/R | rs763888823 | None | 0.484 | D | 0.791 | 0.583 | 0.834966523412 | gnomAD-4.0.0 | 6.57739E-06 | None | None | None | None | N | None | 2.41581E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs763888823 | None | 0.062 | N | 0.709 | 0.37 | 0.609617904835 | gnomAD-4.0.0 | 2.7369E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69851E-06 | 1.15937E-05 | 0 |
I/V | None | None | None | N | 0.184 | 0.062 | 0.230578612272 | gnomAD-4.0.0 | 6.84219E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99496E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.2114 | likely_benign | 0.2706 | benign | -1.797 | Destabilizing | 0.035 | N | 0.657 | neutral | None | None | None | None | N |
I/C | 0.7171 | likely_pathogenic | 0.7585 | pathogenic | -1.2 | Destabilizing | 0.824 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/D | 0.927 | likely_pathogenic | 0.962 | pathogenic | -1.53 | Destabilizing | 0.555 | D | 0.789 | deleterious | None | None | None | None | N |
I/E | 0.7981 | likely_pathogenic | 0.8862 | pathogenic | -1.247 | Destabilizing | 0.555 | D | 0.781 | deleterious | None | None | None | None | N |
I/F | 0.1922 | likely_benign | 0.2856 | benign | -0.963 | Destabilizing | 0.38 | N | 0.71 | prob.delet. | None | None | None | None | N |
I/G | 0.7858 | likely_pathogenic | 0.867 | pathogenic | -2.367 | Highly Destabilizing | 0.555 | D | 0.765 | deleterious | None | None | None | None | N |
I/H | 0.752 | likely_pathogenic | 0.8571 | pathogenic | -1.946 | Destabilizing | 0.935 | D | 0.798 | deleterious | None | None | None | None | N |
I/K | 0.6818 | likely_pathogenic | 0.822 | pathogenic | -1.097 | Destabilizing | 0.317 | N | 0.765 | deleterious | N | 0.505316478 | None | None | N |
I/L | 0.1131 | likely_benign | 0.1389 | benign | -0.141 | Destabilizing | 0.002 | N | 0.43 | neutral | N | 0.466047039 | None | None | N |
I/M | 0.0896 | likely_benign | 0.113 | benign | -0.331 | Destabilizing | 0.002 | N | 0.304 | neutral | N | 0.475513522 | None | None | N |
I/N | 0.6425 | likely_pathogenic | 0.7668 | pathogenic | -1.569 | Destabilizing | 0.555 | D | 0.8 | deleterious | None | None | None | None | N |
I/P | 0.9189 | likely_pathogenic | 0.9458 | pathogenic | -0.675 | Destabilizing | 0.791 | D | 0.789 | deleterious | None | None | None | None | N |
I/Q | 0.6686 | likely_pathogenic | 0.7914 | pathogenic | -1.233 | Destabilizing | 0.555 | D | 0.797 | deleterious | None | None | None | None | N |
I/R | 0.587 | likely_pathogenic | 0.7431 | pathogenic | -1.284 | Destabilizing | 0.484 | N | 0.791 | deleterious | D | 0.523420733 | None | None | N |
I/S | 0.4291 | ambiguous | 0.5436 | ambiguous | -2.323 | Highly Destabilizing | 0.149 | N | 0.746 | deleterious | None | None | None | None | N |
I/T | 0.1614 | likely_benign | 0.2108 | benign | -1.862 | Destabilizing | 0.062 | N | 0.709 | prob.delet. | N | 0.488933743 | None | None | N |
I/V | 0.0605 | likely_benign | 0.0624 | benign | -0.675 | Destabilizing | None | N | 0.184 | neutral | N | 0.40640409 | None | None | N |
I/W | 0.8441 | likely_pathogenic | 0.9124 | pathogenic | -1.25 | Destabilizing | 0.935 | D | 0.79 | deleterious | None | None | None | None | N |
I/Y | 0.6767 | likely_pathogenic | 0.7942 | pathogenic | -0.911 | Destabilizing | 0.555 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.