Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33073 | 99442;99443;99444 | chr2:178538612;178538611;178538610 | chr2:179403339;179403338;179403337 |
N2AB | 31432 | 94519;94520;94521 | chr2:178538612;178538611;178538610 | chr2:179403339;179403338;179403337 |
N2A | 30505 | 91738;91739;91740 | chr2:178538612;178538611;178538610 | chr2:179403339;179403338;179403337 |
N2B | 24008 | 72247;72248;72249 | chr2:178538612;178538611;178538610 | chr2:179403339;179403338;179403337 |
Novex-1 | 24133 | 72622;72623;72624 | chr2:178538612;178538611;178538610 | chr2:179403339;179403338;179403337 |
Novex-2 | 24200 | 72823;72824;72825 | chr2:178538612;178538611;178538610 | chr2:179403339;179403338;179403337 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.994 | D | 0.589 | 0.781 | 0.771421751781 | gnomAD-4.0.0 | 3.18287E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71723E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7773 | likely_pathogenic | 0.804 | pathogenic | -2.566 | Highly Destabilizing | 0.994 | D | 0.589 | neutral | D | 0.561860737 | None | None | N |
V/C | 0.9393 | likely_pathogenic | 0.9398 | pathogenic | -1.891 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
V/D | 0.9978 | likely_pathogenic | 0.9978 | pathogenic | -3.532 | Highly Destabilizing | 0.999 | D | 0.889 | deleterious | D | 0.646896015 | None | None | N |
V/E | 0.9939 | likely_pathogenic | 0.9944 | pathogenic | -3.235 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
V/F | 0.8532 | likely_pathogenic | 0.8581 | pathogenic | -1.587 | Destabilizing | 0.998 | D | 0.802 | deleterious | D | 0.579964992 | None | None | N |
V/G | 0.912 | likely_pathogenic | 0.9153 | pathogenic | -3.098 | Highly Destabilizing | 0.999 | D | 0.884 | deleterious | D | 0.646896015 | None | None | N |
V/H | 0.9978 | likely_pathogenic | 0.9981 | pathogenic | -2.909 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/I | 0.1008 | likely_benign | 0.0953 | benign | -0.99 | Destabilizing | 0.543 | D | 0.288 | neutral | N | 0.505107726 | None | None | N |
V/K | 0.9964 | likely_pathogenic | 0.9969 | pathogenic | -2.225 | Highly Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
V/L | 0.5115 | ambiguous | 0.5248 | ambiguous | -0.99 | Destabilizing | 0.948 | D | 0.512 | neutral | N | 0.517317207 | None | None | N |
V/M | 0.6842 | likely_pathogenic | 0.7091 | pathogenic | -1.197 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
V/N | 0.9897 | likely_pathogenic | 0.9907 | pathogenic | -2.903 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
V/P | 0.9914 | likely_pathogenic | 0.9954 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/Q | 0.9925 | likely_pathogenic | 0.9936 | pathogenic | -2.586 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
V/R | 0.9919 | likely_pathogenic | 0.9925 | pathogenic | -2.224 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/S | 0.95 | likely_pathogenic | 0.9529 | pathogenic | -3.318 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/T | 0.8878 | likely_pathogenic | 0.8943 | pathogenic | -2.886 | Highly Destabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | N |
V/W | 0.9981 | likely_pathogenic | 0.9982 | pathogenic | -2.078 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/Y | 0.9872 | likely_pathogenic | 0.9882 | pathogenic | -1.847 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.