Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33086 | 99481;99482;99483 | chr2:178538573;178538572;178538571 | chr2:179403300;179403299;179403298 |
N2AB | 31445 | 94558;94559;94560 | chr2:178538573;178538572;178538571 | chr2:179403300;179403299;179403298 |
N2A | 30518 | 91777;91778;91779 | chr2:178538573;178538572;178538571 | chr2:179403300;179403299;179403298 |
N2B | 24021 | 72286;72287;72288 | chr2:178538573;178538572;178538571 | chr2:179403300;179403299;179403298 |
Novex-1 | 24146 | 72661;72662;72663 | chr2:178538573;178538572;178538571 | chr2:179403300;179403299;179403298 |
Novex-2 | 24213 | 72862;72863;72864 | chr2:178538573;178538572;178538571 | chr2:179403300;179403299;179403298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.999 | N | 0.795 | 0.338 | 0.264547087235 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8964 | likely_pathogenic | 0.8911 | pathogenic | -0.503 | Destabilizing | 0.998 | D | 0.705 | prob.delet. | None | None | None | None | N |
R/C | 0.608 | likely_pathogenic | 0.5647 | pathogenic | -0.55 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
R/D | 0.9633 | likely_pathogenic | 0.9614 | pathogenic | -0.041 | Destabilizing | 0.999 | D | 0.736 | deleterious | None | None | None | None | N |
R/E | 0.8439 | likely_pathogenic | 0.8233 | pathogenic | 0.112 | Stabilizing | 0.998 | D | 0.735 | deleterious | None | None | None | None | N |
R/F | 0.9131 | likely_pathogenic | 0.9097 | pathogenic | -0.227 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
R/G | 0.7636 | likely_pathogenic | 0.7739 | pathogenic | -0.822 | Destabilizing | 0.999 | D | 0.685 | prob.delet. | N | 0.497018599 | None | None | N |
R/H | 0.4075 | ambiguous | 0.3911 | ambiguous | -1.231 | Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | N |
R/I | 0.7904 | likely_pathogenic | 0.7745 | pathogenic | 0.355 | Stabilizing | 0.999 | D | 0.738 | deleterious | N | 0.50123234 | None | None | N |
R/K | 0.2772 | likely_benign | 0.2696 | benign | -0.41 | Destabilizing | 0.994 | D | 0.675 | prob.neutral | N | 0.454515829 | None | None | N |
R/L | 0.6894 | likely_pathogenic | 0.6882 | pathogenic | 0.355 | Stabilizing | 0.999 | D | 0.685 | prob.delet. | None | None | None | None | N |
R/M | 0.7967 | likely_pathogenic | 0.7932 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
R/N | 0.9314 | likely_pathogenic | 0.9326 | pathogenic | -0.21 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
R/P | 0.8762 | likely_pathogenic | 0.8772 | pathogenic | 0.09 | Stabilizing | 0.999 | D | 0.727 | deleterious | None | None | None | None | N |
R/Q | 0.3434 | ambiguous | 0.3335 | benign | -0.21 | Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
R/S | 0.9302 | likely_pathogenic | 0.926 | pathogenic | -0.796 | Destabilizing | 0.999 | D | 0.795 | deleterious | N | 0.458748213 | None | None | N |
R/T | 0.8687 | likely_pathogenic | 0.8562 | pathogenic | -0.449 | Destabilizing | 0.999 | D | 0.769 | deleterious | N | 0.442184037 | None | None | N |
R/V | 0.8314 | likely_pathogenic | 0.8171 | pathogenic | 0.09 | Stabilizing | 0.999 | D | 0.695 | prob.delet. | None | None | None | None | N |
R/W | 0.6205 | likely_pathogenic | 0.6168 | pathogenic | -0.011 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
R/Y | 0.8215 | likely_pathogenic | 0.8163 | pathogenic | 0.289 | Stabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.