Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3309 | 10150;10151;10152 | chr2:178764590;178764589;178764588 | chr2:179629317;179629316;179629315 |
N2AB | 3309 | 10150;10151;10152 | chr2:178764590;178764589;178764588 | chr2:179629317;179629316;179629315 |
N2A | 3309 | 10150;10151;10152 | chr2:178764590;178764589;178764588 | chr2:179629317;179629316;179629315 |
N2B | 3263 | 10012;10013;10014 | chr2:178764590;178764589;178764588 | chr2:179629317;179629316;179629315 |
Novex-1 | 3263 | 10012;10013;10014 | chr2:178764590;178764589;178764588 | chr2:179629317;179629316;179629315 |
Novex-2 | 3263 | 10012;10013;10014 | chr2:178764590;178764589;178764588 | chr2:179629317;179629316;179629315 |
Novex-3 | 3309 | 10150;10151;10152 | chr2:178764590;178764589;178764588 | chr2:179629317;179629316;179629315 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs2090020782 | None | 1.0 | D | 0.794 | 0.917 | 0.850723522503 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
Y/H | rs2090020782 | None | 1.0 | D | 0.794 | 0.917 | 0.850723522503 | gnomAD-4.0.0 | 6.56961E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9978 | likely_pathogenic | 0.9968 | pathogenic | -2.269 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
Y/C | 0.9634 | likely_pathogenic | 0.9495 | pathogenic | -1.465 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.781871977 | None | None | N |
Y/D | 0.9989 | likely_pathogenic | 0.9985 | pathogenic | -2.991 | Highly Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.781973364 | None | None | N |
Y/E | 0.9994 | likely_pathogenic | 0.9993 | pathogenic | -2.74 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/F | 0.2943 | likely_benign | 0.2614 | benign | -0.738 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | D | 0.608253164 | None | None | N |
Y/G | 0.9961 | likely_pathogenic | 0.9944 | pathogenic | -2.726 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
Y/H | 0.9902 | likely_pathogenic | 0.9841 | pathogenic | -2.035 | Highly Destabilizing | 1.0 | D | 0.794 | deleterious | D | 0.782077687 | None | None | N |
Y/I | 0.9484 | likely_pathogenic | 0.935 | pathogenic | -0.755 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
Y/K | 0.9994 | likely_pathogenic | 0.999 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
Y/L | 0.8666 | likely_pathogenic | 0.858 | pathogenic | -0.755 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
Y/M | 0.9861 | likely_pathogenic | 0.9807 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
Y/N | 0.9935 | likely_pathogenic | 0.99 | pathogenic | -2.801 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | D | 0.781871977 | None | None | N |
Y/P | 0.9988 | likely_pathogenic | 0.9982 | pathogenic | -1.275 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
Y/Q | 0.9994 | likely_pathogenic | 0.999 | pathogenic | -2.346 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Y/R | 0.9972 | likely_pathogenic | 0.9958 | pathogenic | -2.127 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/S | 0.9947 | likely_pathogenic | 0.9918 | pathogenic | -3.087 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | D | 0.781871977 | None | None | N |
Y/T | 0.9977 | likely_pathogenic | 0.9963 | pathogenic | -2.686 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Y/V | 0.9177 | likely_pathogenic | 0.9041 | pathogenic | -1.275 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Y/W | 0.9132 | likely_pathogenic | 0.8831 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.