Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33090 | 99493;99494;99495 | chr2:178538561;178538560;178538559 | chr2:179403288;179403287;179403286 |
N2AB | 31449 | 94570;94571;94572 | chr2:178538561;178538560;178538559 | chr2:179403288;179403287;179403286 |
N2A | 30522 | 91789;91790;91791 | chr2:178538561;178538560;178538559 | chr2:179403288;179403287;179403286 |
N2B | 24025 | 72298;72299;72300 | chr2:178538561;178538560;178538559 | chr2:179403288;179403287;179403286 |
Novex-1 | 24150 | 72673;72674;72675 | chr2:178538561;178538560;178538559 | chr2:179403288;179403287;179403286 |
Novex-2 | 24217 | 72874;72875;72876 | chr2:178538561;178538560;178538559 | chr2:179403288;179403287;179403286 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.947 | N | 0.45 | 0.266 | 0.453679287548 | gnomAD-4.0.0 | 6.84784E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9992E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0638 | likely_benign | 0.06 | benign | -0.476 | Destabilizing | None | N | 0.146 | neutral | N | 0.410322334 | None | None | N |
S/C | 0.1074 | likely_benign | 0.1103 | benign | -0.358 | Destabilizing | 0.947 | D | 0.45 | neutral | N | 0.432545833 | None | None | N |
S/D | 0.5172 | ambiguous | 0.5503 | ambiguous | 0.096 | Stabilizing | 0.524 | D | 0.397 | neutral | None | None | None | None | N |
S/E | 0.5943 | likely_pathogenic | 0.6305 | pathogenic | 0.017 | Stabilizing | 0.524 | D | 0.399 | neutral | None | None | None | None | N |
S/F | 0.2158 | likely_benign | 0.2559 | benign | -0.927 | Destabilizing | 0.855 | D | 0.511 | neutral | N | 0.462252665 | None | None | N |
S/G | 0.0691 | likely_benign | 0.0748 | benign | -0.623 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | N |
S/H | 0.378 | ambiguous | 0.4268 | ambiguous | -1.088 | Destabilizing | 0.96 | D | 0.453 | neutral | None | None | None | None | N |
S/I | 0.1455 | likely_benign | 0.1601 | benign | -0.214 | Destabilizing | 0.524 | D | 0.553 | neutral | None | None | None | None | N |
S/K | 0.6752 | likely_pathogenic | 0.7202 | pathogenic | -0.578 | Destabilizing | 0.524 | D | 0.4 | neutral | None | None | None | None | N |
S/L | 0.0977 | likely_benign | 0.11 | benign | -0.214 | Destabilizing | 0.185 | N | 0.439 | neutral | None | None | None | None | N |
S/M | 0.1676 | likely_benign | 0.1689 | benign | 0.031 | Stabilizing | 0.96 | D | 0.455 | neutral | None | None | None | None | N |
S/N | 0.1008 | likely_benign | 0.1131 | benign | -0.303 | Destabilizing | 0.524 | D | 0.404 | neutral | None | None | None | None | N |
S/P | 0.1258 | likely_benign | 0.1138 | benign | -0.271 | Destabilizing | 0.627 | D | 0.543 | neutral | N | 0.386714756 | None | None | N |
S/Q | 0.4971 | ambiguous | 0.5214 | ambiguous | -0.56 | Destabilizing | 0.887 | D | 0.444 | neutral | None | None | None | None | N |
S/R | 0.6144 | likely_pathogenic | 0.6782 | pathogenic | -0.346 | Destabilizing | 0.524 | D | 0.537 | neutral | None | None | None | None | N |
S/T | 0.0643 | likely_benign | 0.0611 | benign | -0.419 | Destabilizing | 0.005 | N | 0.211 | neutral | N | 0.441066529 | None | None | N |
S/V | 0.145 | likely_benign | 0.1485 | benign | -0.271 | Destabilizing | 0.185 | N | 0.439 | neutral | None | None | None | None | N |
S/W | 0.437 | ambiguous | 0.5198 | ambiguous | -0.894 | Destabilizing | 0.989 | D | 0.67 | prob.neutral | None | None | None | None | N |
S/Y | 0.2175 | likely_benign | 0.2666 | benign | -0.639 | Destabilizing | 0.947 | D | 0.525 | neutral | N | 0.461905948 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.