Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33092 | 99499;99500;99501 | chr2:178538555;178538554;178538553 | chr2:179403282;179403281;179403280 |
N2AB | 31451 | 94576;94577;94578 | chr2:178538555;178538554;178538553 | chr2:179403282;179403281;179403280 |
N2A | 30524 | 91795;91796;91797 | chr2:178538555;178538554;178538553 | chr2:179403282;179403281;179403280 |
N2B | 24027 | 72304;72305;72306 | chr2:178538555;178538554;178538553 | chr2:179403282;179403281;179403280 |
Novex-1 | 24152 | 72679;72680;72681 | chr2:178538555;178538554;178538553 | chr2:179403282;179403281;179403280 |
Novex-2 | 24219 | 72880;72881;72882 | chr2:178538555;178538554;178538553 | chr2:179403282;179403281;179403280 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs778385575 | 0.236 | 0.693 | N | 0.715 | 0.26 | 0.311079019809 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.34E-05 | None | 0 | 0 | 0 |
K/N | rs778385575 | 0.236 | 0.693 | N | 0.715 | 0.26 | 0.311079019809 | gnomAD-4.0.0 | 1.59867E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.44388E-05 | 0 |
K/Q | None | None | 0.531 | D | 0.737 | 0.213 | 0.27855597813 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7393 | likely_pathogenic | 0.7691 | pathogenic | -0.409 | Destabilizing | 0.46 | N | 0.654 | prob.neutral | None | None | None | None | I |
K/C | 0.8741 | likely_pathogenic | 0.8967 | pathogenic | -0.457 | Destabilizing | 0.986 | D | 0.775 | deleterious | None | None | None | None | I |
K/D | 0.935 | likely_pathogenic | 0.944 | pathogenic | 0.114 | Stabilizing | 0.749 | D | 0.753 | deleterious | None | None | None | None | I |
K/E | 0.5884 | likely_pathogenic | 0.6131 | pathogenic | 0.177 | Stabilizing | 0.244 | N | 0.658 | prob.neutral | N | 0.514700283 | None | None | I |
K/F | 0.9406 | likely_pathogenic | 0.9532 | pathogenic | -0.367 | Destabilizing | 0.958 | D | 0.736 | deleterious | None | None | None | None | I |
K/G | 0.8458 | likely_pathogenic | 0.8724 | pathogenic | -0.71 | Destabilizing | 0.749 | D | 0.562 | neutral | None | None | None | None | I |
K/H | 0.5573 | ambiguous | 0.6257 | pathogenic | -1.085 | Destabilizing | 0.958 | D | 0.743 | deleterious | None | None | None | None | I |
K/I | 0.6741 | likely_pathogenic | 0.6948 | pathogenic | 0.338 | Stabilizing | 0.858 | D | 0.759 | deleterious | None | None | None | None | I |
K/L | 0.6792 | likely_pathogenic | 0.7106 | pathogenic | 0.338 | Stabilizing | 0.749 | D | 0.562 | neutral | None | None | None | None | I |
K/M | 0.5445 | ambiguous | 0.5788 | pathogenic | 0.288 | Stabilizing | 0.981 | D | 0.755 | deleterious | N | 0.505910228 | None | None | I |
K/N | 0.8023 | likely_pathogenic | 0.8338 | pathogenic | -0.145 | Destabilizing | 0.693 | D | 0.715 | prob.delet. | N | 0.492085111 | None | None | I |
K/P | 0.9033 | likely_pathogenic | 0.9127 | pathogenic | 0.12 | Stabilizing | 0.858 | D | 0.765 | deleterious | None | None | None | None | I |
K/Q | 0.2697 | likely_benign | 0.3013 | benign | -0.312 | Destabilizing | 0.531 | D | 0.737 | deleterious | D | 0.534326194 | None | None | I |
K/R | 0.106 | likely_benign | 0.1216 | benign | -0.346 | Destabilizing | 0.005 | N | 0.437 | neutral | N | 0.499789546 | None | None | I |
K/S | 0.7797 | likely_pathogenic | 0.8144 | pathogenic | -0.815 | Destabilizing | 0.46 | N | 0.712 | prob.delet. | None | None | None | None | I |
K/T | 0.4227 | ambiguous | 0.4452 | ambiguous | -0.563 | Destabilizing | 0.693 | D | 0.672 | prob.neutral | N | 0.493922366 | None | None | I |
K/V | 0.6301 | likely_pathogenic | 0.6521 | pathogenic | 0.12 | Stabilizing | 0.749 | D | 0.711 | prob.delet. | None | None | None | None | I |
K/W | 0.9399 | likely_pathogenic | 0.9583 | pathogenic | -0.241 | Destabilizing | 0.986 | D | 0.783 | deleterious | None | None | None | None | I |
K/Y | 0.8908 | likely_pathogenic | 0.9163 | pathogenic | 0.077 | Stabilizing | 0.858 | D | 0.757 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.