Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33104 | 99535;99536;99537 | chr2:178537897;178537896;178537895 | chr2:179402624;179402623;179402622 |
N2AB | 31463 | 94612;94613;94614 | chr2:178537897;178537896;178537895 | chr2:179402624;179402623;179402622 |
N2A | 30536 | 91831;91832;91833 | chr2:178537897;178537896;178537895 | chr2:179402624;179402623;179402622 |
N2B | 24039 | 72340;72341;72342 | chr2:178537897;178537896;178537895 | chr2:179402624;179402623;179402622 |
Novex-1 | 24164 | 72715;72716;72717 | chr2:178537897;178537896;178537895 | chr2:179402624;179402623;179402622 |
Novex-2 | 24231 | 72916;72917;72918 | chr2:178537897;178537896;178537895 | chr2:179402624;179402623;179402622 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs766169253 | -0.398 | 1.0 | N | 0.701 | 0.371 | None | gnomAD-2.1.1 | 2.86E-05 | None | None | None | None | N | None | 6.54E-05 | 0 | None | 0 | 1.69396E-04 | None | 0 | None | 0 | 2.72E-05 | 0 |
R/C | rs766169253 | -0.398 | 1.0 | N | 0.701 | 0.371 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 4.79846E-04 |
R/C | rs766169253 | -0.398 | 1.0 | N | 0.701 | 0.371 | None | gnomAD-4.0.0 | 4.40852E-05 | None | None | None | None | N | None | 5.34817E-05 | 0 | None | 0 | 4.46369E-05 | None | 1.57129E-05 | 0 | 5.00874E-05 | 0 | 8.01899E-05 |
R/H | rs758617553 | -0.918 | 0.995 | N | 0.533 | 0.248 | 0.15556083564 | gnomAD-2.1.1 | 1.09E-05 | None | None | None | None | N | None | 4.16E-05 | 0 | None | 0 | 0 | None | 3.31E-05 | None | 0 | 7.95E-06 | 0 |
R/H | rs758617553 | -0.918 | 0.995 | N | 0.533 | 0.248 | 0.15556083564 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/H | rs758617553 | -0.918 | 0.995 | N | 0.533 | 0.248 | 0.15556083564 | gnomAD-4.0.0 | 6.82943E-06 | None | None | None | None | N | None | 1.33711E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.94218E-06 | 2.20347E-05 | 1.60375E-05 |
R/L | rs758617553 | None | 0.821 | N | 0.5 | 0.181 | 0.338592109245 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/L | rs758617553 | None | 0.821 | N | 0.5 | 0.181 | 0.338592109245 | gnomAD-4.0.0 | 6.57471E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47042E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7749 | likely_pathogenic | 0.7367 | pathogenic | -0.185 | Destabilizing | 0.852 | D | 0.522 | neutral | None | None | None | None | N |
R/C | 0.4832 | ambiguous | 0.4075 | ambiguous | -0.351 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | N | 0.461021259 | None | None | N |
R/D | 0.929 | likely_pathogenic | 0.916 | pathogenic | -0.032 | Destabilizing | 0.953 | D | 0.553 | neutral | None | None | None | None | N |
R/E | 0.6974 | likely_pathogenic | 0.6326 | pathogenic | 0.072 | Stabilizing | 0.465 | N | 0.501 | neutral | None | None | None | None | N |
R/F | 0.8311 | likely_pathogenic | 0.817 | pathogenic | -0.165 | Destabilizing | 0.98 | D | 0.661 | neutral | None | None | None | None | N |
R/G | 0.6301 | likely_pathogenic | 0.5722 | pathogenic | -0.448 | Destabilizing | 0.917 | D | 0.5 | neutral | N | 0.460767769 | None | None | N |
R/H | 0.2938 | likely_benign | 0.2734 | benign | -0.857 | Destabilizing | 0.995 | D | 0.533 | neutral | N | 0.48781946 | None | None | N |
R/I | 0.5143 | ambiguous | 0.4583 | ambiguous | 0.494 | Stabilizing | 0.945 | D | 0.661 | neutral | None | None | None | None | N |
R/K | 0.1944 | likely_benign | 0.1828 | benign | -0.304 | Destabilizing | 0.001 | N | 0.143 | neutral | None | None | None | None | N |
R/L | 0.4611 | ambiguous | 0.4528 | ambiguous | 0.494 | Stabilizing | 0.821 | D | 0.5 | neutral | N | 0.391866207 | None | None | N |
R/M | 0.6199 | likely_pathogenic | 0.5524 | ambiguous | -0.04 | Destabilizing | 0.995 | D | 0.553 | neutral | None | None | None | None | N |
R/N | 0.8683 | likely_pathogenic | 0.8587 | pathogenic | -0.044 | Destabilizing | 0.953 | D | 0.505 | neutral | None | None | None | None | N |
R/P | 0.8821 | likely_pathogenic | 0.8729 | pathogenic | 0.29 | Stabilizing | 0.987 | D | 0.635 | neutral | N | 0.48324036 | None | None | N |
R/Q | 0.1926 | likely_benign | 0.177 | benign | -0.111 | Destabilizing | 0.937 | D | 0.538 | neutral | None | None | None | None | N |
R/S | 0.8259 | likely_pathogenic | 0.7916 | pathogenic | -0.511 | Destabilizing | 0.917 | D | 0.537 | neutral | N | 0.403182066 | None | None | N |
R/T | 0.6351 | likely_pathogenic | 0.5708 | pathogenic | -0.244 | Destabilizing | 0.852 | D | 0.515 | neutral | None | None | None | None | N |
R/V | 0.6215 | likely_pathogenic | 0.5805 | pathogenic | 0.29 | Stabilizing | 0.925 | D | 0.642 | neutral | None | None | None | None | N |
R/W | 0.4263 | ambiguous | 0.3552 | ambiguous | -0.069 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
R/Y | 0.7239 | likely_pathogenic | 0.701 | pathogenic | 0.29 | Stabilizing | 0.98 | D | 0.631 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.