Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33106 | 99541;99542;99543 | chr2:178537891;178537890;178537889 | chr2:179402618;179402617;179402616 |
N2AB | 31465 | 94618;94619;94620 | chr2:178537891;178537890;178537889 | chr2:179402618;179402617;179402616 |
N2A | 30538 | 91837;91838;91839 | chr2:178537891;178537890;178537889 | chr2:179402618;179402617;179402616 |
N2B | 24041 | 72346;72347;72348 | chr2:178537891;178537890;178537889 | chr2:179402618;179402617;179402616 |
Novex-1 | 24166 | 72721;72722;72723 | chr2:178537891;178537890;178537889 | chr2:179402618;179402617;179402616 |
Novex-2 | 24233 | 72922;72923;72924 | chr2:178537891;178537890;178537889 | chr2:179402618;179402617;179402616 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.984 | N | 0.564 | 0.377 | 0.355865052028 | gnomAD-4.0.0 | 6.85091E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65815E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1277 | likely_benign | 0.127 | benign | -0.552 | Destabilizing | 0.985 | D | 0.668 | neutral | N | 0.461196659 | None | None | N |
E/C | 0.8755 | likely_pathogenic | 0.8917 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/D | 0.1168 | likely_benign | 0.1459 | benign | -0.51 | Destabilizing | 0.013 | N | 0.217 | neutral | N | 0.469874857 | None | None | N |
E/F | 0.78 | likely_pathogenic | 0.8213 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/G | 0.1654 | likely_benign | 0.1613 | benign | -0.801 | Destabilizing | 0.997 | D | 0.716 | prob.delet. | N | 0.443651048 | None | None | N |
E/H | 0.5623 | ambiguous | 0.6419 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
E/I | 0.3693 | ambiguous | 0.4241 | ambiguous | 0.088 | Stabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
E/K | 0.1998 | likely_benign | 0.2179 | benign | -0.013 | Destabilizing | 0.984 | D | 0.564 | neutral | N | 0.426139936 | None | None | N |
E/L | 0.4039 | ambiguous | 0.4692 | ambiguous | 0.088 | Stabilizing | 0.996 | D | 0.797 | deleterious | None | None | None | None | N |
E/M | 0.4613 | ambiguous | 0.5178 | ambiguous | 0.294 | Stabilizing | 0.998 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/N | 0.2556 | likely_benign | 0.2886 | benign | -0.31 | Destabilizing | 0.984 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/P | 0.3387 | likely_benign | 0.325 | benign | -0.105 | Destabilizing | 0.992 | D | 0.798 | deleterious | None | None | None | None | N |
E/Q | 0.1675 | likely_benign | 0.1915 | benign | -0.253 | Destabilizing | 0.997 | D | 0.631 | neutral | N | 0.446112563 | None | None | N |
E/R | 0.3594 | ambiguous | 0.3939 | ambiguous | 0.205 | Stabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/S | 0.2173 | likely_benign | 0.2331 | benign | -0.519 | Destabilizing | 0.977 | D | 0.614 | neutral | None | None | None | None | N |
E/T | 0.2081 | likely_benign | 0.2378 | benign | -0.32 | Destabilizing | 0.998 | D | 0.743 | deleterious | None | None | None | None | N |
E/V | 0.2033 | likely_benign | 0.2316 | benign | -0.105 | Destabilizing | 0.998 | D | 0.78 | deleterious | N | 0.475915395 | None | None | N |
E/W | 0.9242 | likely_pathogenic | 0.9491 | pathogenic | -0.133 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/Y | 0.6695 | likely_pathogenic | 0.7365 | pathogenic | -0.08 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.