Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33119 | 99580;99581;99582 | chr2:178537852;178537851;178537850 | chr2:179402579;179402578;179402577 |
N2AB | 31478 | 94657;94658;94659 | chr2:178537852;178537851;178537850 | chr2:179402579;179402578;179402577 |
N2A | 30551 | 91876;91877;91878 | chr2:178537852;178537851;178537850 | chr2:179402579;179402578;179402577 |
N2B | 24054 | 72385;72386;72387 | chr2:178537852;178537851;178537850 | chr2:179402579;179402578;179402577 |
Novex-1 | 24179 | 72760;72761;72762 | chr2:178537852;178537851;178537850 | chr2:179402579;179402578;179402577 |
Novex-2 | 24246 | 72961;72962;72963 | chr2:178537852;178537851;178537850 | chr2:179402579;179402578;179402577 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs775783429 | 0.596 | 0.166 | N | 0.495 | 0.162 | 0.119812018005 | gnomAD-2.1.1 | 2.42E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.96258E-04 | None | 0 | 0 | 0 |
Q/R | rs775783429 | 0.596 | 0.166 | N | 0.495 | 0.162 | 0.119812018005 | gnomAD-4.0.0 | 2.06933E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.71984E-04 | 3.02462E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2072 | likely_benign | 0.2177 | benign | -0.308 | Destabilizing | 0.267 | N | 0.393 | neutral | None | None | None | None | N |
Q/C | 0.6227 | likely_pathogenic | 0.5902 | pathogenic | 0.164 | Stabilizing | 0.98 | D | 0.465 | neutral | None | None | None | None | N |
Q/D | 0.4042 | ambiguous | 0.3978 | ambiguous | 0.058 | Stabilizing | 0.378 | N | 0.479 | neutral | None | None | None | None | N |
Q/E | 0.0946 | likely_benign | 0.086 | benign | 0.054 | Stabilizing | 0.116 | N | 0.426 | neutral | N | 0.363970316 | None | None | N |
Q/F | 0.613 | likely_pathogenic | 0.5993 | pathogenic | -0.412 | Destabilizing | 0.889 | D | 0.521 | neutral | None | None | None | None | N |
Q/G | 0.3431 | ambiguous | 0.3392 | benign | -0.533 | Destabilizing | 0.669 | D | 0.499 | neutral | None | None | None | None | N |
Q/H | 0.1709 | likely_benign | 0.1804 | benign | -0.413 | Destabilizing | 0.929 | D | 0.484 | neutral | N | 0.449319787 | None | None | N |
Q/I | 0.2764 | likely_benign | 0.2567 | benign | 0.205 | Stabilizing | 0.005 | N | 0.462 | neutral | None | None | None | None | N |
Q/K | 0.0869 | likely_benign | 0.0785 | benign | 0.059 | Stabilizing | 0.001 | N | 0.323 | neutral | N | 0.394677226 | None | None | N |
Q/L | 0.1209 | likely_benign | 0.1199 | benign | 0.205 | Stabilizing | 0.052 | N | 0.413 | neutral | N | 0.430501953 | None | None | N |
Q/M | 0.2991 | likely_benign | 0.3017 | benign | 0.493 | Stabilizing | 0.851 | D | 0.468 | neutral | None | None | None | None | N |
Q/N | 0.2434 | likely_benign | 0.249 | benign | -0.331 | Destabilizing | 0.378 | N | 0.48 | neutral | None | None | None | None | N |
Q/P | 0.3037 | likely_benign | 0.2813 | benign | 0.064 | Stabilizing | 0.482 | N | 0.516 | neutral | N | 0.509098809 | None | None | N |
Q/R | 0.1142 | likely_benign | 0.1058 | benign | 0.185 | Stabilizing | 0.166 | N | 0.495 | neutral | N | 0.411108116 | None | None | N |
Q/S | 0.1963 | likely_benign | 0.21 | benign | -0.354 | Destabilizing | 0.295 | N | 0.451 | neutral | None | None | None | None | N |
Q/T | 0.1292 | likely_benign | 0.1281 | benign | -0.185 | Destabilizing | None | N | 0.328 | neutral | None | None | None | None | N |
Q/V | 0.1768 | likely_benign | 0.1735 | benign | 0.064 | Stabilizing | 0.048 | N | 0.413 | neutral | None | None | None | None | N |
Q/W | 0.5944 | likely_pathogenic | 0.5836 | pathogenic | -0.348 | Destabilizing | 0.996 | D | 0.48 | neutral | None | None | None | None | N |
Q/Y | 0.4541 | ambiguous | 0.4367 | ambiguous | -0.101 | Destabilizing | 0.961 | D | 0.55 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.