Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33125 | 99598;99599;99600 | chr2:178537834;178537833;178537832 | chr2:179402561;179402560;179402559 |
N2AB | 31484 | 94675;94676;94677 | chr2:178537834;178537833;178537832 | chr2:179402561;179402560;179402559 |
N2A | 30557 | 91894;91895;91896 | chr2:178537834;178537833;178537832 | chr2:179402561;179402560;179402559 |
N2B | 24060 | 72403;72404;72405 | chr2:178537834;178537833;178537832 | chr2:179402561;179402560;179402559 |
Novex-1 | 24185 | 72778;72779;72780 | chr2:178537834;178537833;178537832 | chr2:179402561;179402560;179402559 |
Novex-2 | 24252 | 72979;72980;72981 | chr2:178537834;178537833;178537832 | chr2:179402561;179402560;179402559 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1692289481 | None | 0.003 | N | 0.139 | 0.176 | 0.626300511109 | gnomAD-4.0.0 | 3.18323E-06 | None | None | None | None | N | None | 0 | 4.57561E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2368 | likely_benign | 0.3355 | benign | -1.323 | Destabilizing | 0.842 | D | 0.531 | neutral | N | 0.493287648 | None | None | N |
V/C | 0.8407 | likely_pathogenic | 0.889 | pathogenic | -0.835 | Destabilizing | 0.999 | D | 0.547 | neutral | None | None | None | None | N |
V/D | 0.7559 | likely_pathogenic | 0.8231 | pathogenic | -1.194 | Destabilizing | 0.999 | D | 0.657 | neutral | N | 0.486535034 | None | None | N |
V/E | 0.6409 | likely_pathogenic | 0.7014 | pathogenic | -1.207 | Destabilizing | 0.993 | D | 0.616 | neutral | None | None | None | None | N |
V/F | 0.2334 | likely_benign | 0.2989 | benign | -1.016 | Destabilizing | 0.988 | D | 0.553 | neutral | N | 0.513260275 | None | None | N |
V/G | 0.4413 | ambiguous | 0.5823 | pathogenic | -1.623 | Destabilizing | 0.997 | D | 0.63 | neutral | N | 0.475915395 | None | None | N |
V/H | 0.7613 | likely_pathogenic | 0.8329 | pathogenic | -1.132 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
V/I | 0.0679 | likely_benign | 0.0772 | benign | -0.606 | Destabilizing | 0.003 | N | 0.126 | neutral | N | 0.509430536 | None | None | N |
V/K | 0.7482 | likely_pathogenic | 0.7784 | pathogenic | -1.194 | Destabilizing | 0.991 | D | 0.618 | neutral | None | None | None | None | N |
V/L | 0.1686 | likely_benign | 0.2539 | benign | -0.606 | Destabilizing | 0.003 | N | 0.139 | neutral | N | 0.490018056 | None | None | N |
V/M | 0.1704 | likely_benign | 0.2385 | benign | -0.467 | Destabilizing | 0.988 | D | 0.527 | neutral | None | None | None | None | N |
V/N | 0.4959 | ambiguous | 0.6667 | pathogenic | -0.932 | Destabilizing | 0.979 | D | 0.664 | neutral | None | None | None | None | N |
V/P | 0.941 | likely_pathogenic | 0.9642 | pathogenic | -0.81 | Destabilizing | 0.979 | D | 0.616 | neutral | None | None | None | None | N |
V/Q | 0.5628 | ambiguous | 0.6621 | pathogenic | -1.109 | Destabilizing | 0.996 | D | 0.622 | neutral | None | None | None | None | N |
V/R | 0.6341 | likely_pathogenic | 0.6512 | pathogenic | -0.641 | Destabilizing | 0.996 | D | 0.663 | neutral | None | None | None | None | N |
V/S | 0.289 | likely_benign | 0.4203 | ambiguous | -1.401 | Destabilizing | 0.992 | D | 0.562 | neutral | None | None | None | None | N |
V/T | 0.1858 | likely_benign | 0.2527 | benign | -1.307 | Destabilizing | 0.873 | D | 0.486 | neutral | None | None | None | None | N |
V/W | 0.8765 | likely_pathogenic | 0.9094 | pathogenic | -1.193 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
V/Y | 0.721 | likely_pathogenic | 0.7886 | pathogenic | -0.914 | Destabilizing | 0.996 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.