Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33139 | 99640;99641;99642 | chr2:178537792;178537791;178537790 | chr2:179402519;179402518;179402517 |
N2AB | 31498 | 94717;94718;94719 | chr2:178537792;178537791;178537790 | chr2:179402519;179402518;179402517 |
N2A | 30571 | 91936;91937;91938 | chr2:178537792;178537791;178537790 | chr2:179402519;179402518;179402517 |
N2B | 24074 | 72445;72446;72447 | chr2:178537792;178537791;178537790 | chr2:179402519;179402518;179402517 |
Novex-1 | 24199 | 72820;72821;72822 | chr2:178537792;178537791;178537790 | chr2:179402519;179402518;179402517 |
Novex-2 | 24266 | 73021;73022;73023 | chr2:178537792;178537791;178537790 | chr2:179402519;179402518;179402517 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs779723670 | 0.359 | 0.974 | N | 0.562 | 0.38 | 0.366277470483 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | I | None | 6.46E-05 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
K/E | rs779723670 | 0.359 | 0.974 | N | 0.562 | 0.38 | 0.366277470483 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/E | rs779723670 | 0.359 | 0.974 | N | 0.562 | 0.38 | 0.366277470483 | gnomAD-4.0.0 | 2.41682E-05 | None | None | None | None | I | None | 2.66973E-05 | 3.33456E-05 | None | 0 | 0 | None | 0 | 0 | 2.79711E-05 | 0 | 3.20225E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7837 | likely_pathogenic | 0.7806 | pathogenic | -0.162 | Destabilizing | 0.997 | D | 0.598 | neutral | None | None | None | None | I |
K/C | 0.8932 | likely_pathogenic | 0.9098 | pathogenic | -0.482 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | I |
K/D | 0.8527 | likely_pathogenic | 0.8438 | pathogenic | 0.185 | Stabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | I |
K/E | 0.3756 | ambiguous | 0.3462 | ambiguous | 0.254 | Stabilizing | 0.974 | D | 0.562 | neutral | N | 0.472509731 | None | None | I |
K/F | 0.9528 | likely_pathogenic | 0.9573 | pathogenic | -0.122 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | I |
K/G | 0.8385 | likely_pathogenic | 0.8427 | pathogenic | -0.427 | Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | I |
K/H | 0.5348 | ambiguous | 0.56 | ambiguous | -0.534 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
K/I | 0.7018 | likely_pathogenic | 0.7004 | pathogenic | 0.481 | Stabilizing | 0.988 | D | 0.701 | prob.neutral | D | 0.523960058 | None | None | I |
K/L | 0.751 | likely_pathogenic | 0.7384 | pathogenic | 0.481 | Stabilizing | 0.972 | D | 0.555 | neutral | None | None | None | None | I |
K/M | 0.5644 | likely_pathogenic | 0.5479 | ambiguous | 0.028 | Stabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | I |
K/N | 0.6947 | likely_pathogenic | 0.6897 | pathogenic | -0.136 | Destabilizing | 0.999 | D | 0.628 | neutral | D | 0.525056136 | None | None | I |
K/P | 0.9901 | likely_pathogenic | 0.9906 | pathogenic | 0.296 | Stabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
K/Q | 0.2334 | likely_benign | 0.2443 | benign | -0.173 | Destabilizing | 0.981 | D | 0.617 | neutral | N | 0.499272258 | None | None | I |
K/R | 0.0959 | likely_benign | 0.1015 | benign | -0.152 | Destabilizing | 0.143 | N | 0.307 | neutral | N | 0.510702759 | None | None | I |
K/S | 0.7732 | likely_pathogenic | 0.7796 | pathogenic | -0.668 | Destabilizing | 0.997 | D | 0.576 | neutral | None | None | None | None | I |
K/T | 0.502 | ambiguous | 0.4845 | ambiguous | -0.421 | Destabilizing | 0.996 | D | 0.611 | neutral | N | 0.495253304 | None | None | I |
K/V | 0.6546 | likely_pathogenic | 0.6535 | pathogenic | 0.296 | Stabilizing | 0.978 | D | 0.661 | neutral | None | None | None | None | I |
K/W | 0.9375 | likely_pathogenic | 0.9454 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
K/Y | 0.8825 | likely_pathogenic | 0.8878 | pathogenic | 0.201 | Stabilizing | 0.994 | D | 0.669 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.