Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3314 | 10165;10166;10167 | chr2:178764575;178764574;178764573 | chr2:179629302;179629301;179629300 |
N2AB | 3314 | 10165;10166;10167 | chr2:178764575;178764574;178764573 | chr2:179629302;179629301;179629300 |
N2A | 3314 | 10165;10166;10167 | chr2:178764575;178764574;178764573 | chr2:179629302;179629301;179629300 |
N2B | 3268 | 10027;10028;10029 | chr2:178764575;178764574;178764573 | chr2:179629302;179629301;179629300 |
Novex-1 | 3268 | 10027;10028;10029 | chr2:178764575;178764574;178764573 | chr2:179629302;179629301;179629300 |
Novex-2 | 3268 | 10027;10028;10029 | chr2:178764575;178764574;178764573 | chr2:179629302;179629301;179629300 |
Novex-3 | 3314 | 10165;10166;10167 | chr2:178764575;178764574;178764573 | chr2:179629302;179629301;179629300 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs769286646 | -0.323 | 0.497 | N | 0.595 | 0.334 | 0.215869574891 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | I | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/Q | rs769286646 | -0.323 | 0.497 | N | 0.595 | 0.334 | 0.215869574891 | gnomAD-4.0.0 | 1.59054E-06 | None | None | None | None | I | None | 0 | 2.28624E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6453 | likely_pathogenic | 0.482 | ambiguous | -0.494 | Destabilizing | 0.072 | N | 0.581 | neutral | None | None | None | None | I |
K/C | 0.8871 | likely_pathogenic | 0.7894 | pathogenic | -0.603 | Destabilizing | 0.968 | D | 0.755 | deleterious | None | None | None | None | I |
K/D | 0.9286 | likely_pathogenic | 0.8706 | pathogenic | -0.551 | Destabilizing | 0.567 | D | 0.611 | neutral | None | None | None | None | I |
K/E | 0.3843 | ambiguous | 0.2498 | benign | -0.463 | Destabilizing | 0.124 | N | 0.535 | neutral | N | 0.465070562 | None | None | I |
K/F | 0.9481 | likely_pathogenic | 0.9 | pathogenic | -0.305 | Destabilizing | 0.726 | D | 0.74 | deleterious | None | None | None | None | I |
K/G | 0.8002 | likely_pathogenic | 0.641 | pathogenic | -0.847 | Destabilizing | 0.157 | N | 0.654 | neutral | None | None | None | None | I |
K/H | 0.5914 | likely_pathogenic | 0.4537 | ambiguous | -1.293 | Destabilizing | 0.909 | D | 0.652 | neutral | None | None | None | None | I |
K/I | 0.6595 | likely_pathogenic | 0.5194 | ambiguous | 0.413 | Stabilizing | 0.567 | D | 0.736 | prob.delet. | None | None | None | None | I |
K/L | 0.7033 | likely_pathogenic | 0.5728 | pathogenic | 0.413 | Stabilizing | 0.272 | N | 0.672 | neutral | None | None | None | None | I |
K/M | 0.4827 | ambiguous | 0.3665 | ambiguous | 0.412 | Stabilizing | 0.958 | D | 0.653 | neutral | D | 0.561721778 | None | None | I |
K/N | 0.7861 | likely_pathogenic | 0.7117 | pathogenic | -0.571 | Destabilizing | 0.22 | N | 0.55 | neutral | N | 0.510244506 | None | None | I |
K/P | 0.9925 | likely_pathogenic | 0.9838 | pathogenic | 0.141 | Stabilizing | 0.726 | D | 0.653 | neutral | None | None | None | None | I |
K/Q | 0.221 | likely_benign | 0.1526 | benign | -0.724 | Destabilizing | 0.497 | N | 0.595 | neutral | N | 0.514008381 | None | None | I |
K/R | 0.1016 | likely_benign | 0.078 | benign | -0.679 | Destabilizing | 0.002 | N | 0.256 | neutral | N | 0.479635431 | None | None | I |
K/S | 0.6897 | likely_pathogenic | 0.554 | ambiguous | -1.143 | Destabilizing | 0.005 | N | 0.269 | neutral | None | None | None | None | I |
K/T | 0.3581 | ambiguous | 0.2394 | benign | -0.862 | Destabilizing | 0.004 | N | 0.345 | neutral | N | 0.481485191 | None | None | I |
K/V | 0.5575 | ambiguous | 0.4192 | ambiguous | 0.141 | Stabilizing | 0.567 | D | 0.647 | neutral | None | None | None | None | I |
K/W | 0.9272 | likely_pathogenic | 0.8406 | pathogenic | -0.215 | Destabilizing | 0.968 | D | 0.796 | deleterious | None | None | None | None | I |
K/Y | 0.8923 | likely_pathogenic | 0.8079 | pathogenic | 0.114 | Stabilizing | 0.726 | D | 0.739 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.