Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33140 | 99643;99644;99645 | chr2:178537789;178537788;178537787 | chr2:179402516;179402515;179402514 |
N2AB | 31499 | 94720;94721;94722 | chr2:178537789;178537788;178537787 | chr2:179402516;179402515;179402514 |
N2A | 30572 | 91939;91940;91941 | chr2:178537789;178537788;178537787 | chr2:179402516;179402515;179402514 |
N2B | 24075 | 72448;72449;72450 | chr2:178537789;178537788;178537787 | chr2:179402516;179402515;179402514 |
Novex-1 | 24200 | 72823;72824;72825 | chr2:178537789;178537788;178537787 | chr2:179402516;179402515;179402514 |
Novex-2 | 24267 | 73024;73025;73026 | chr2:178537789;178537788;178537787 | chr2:179402516;179402515;179402514 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | N | 0.675 | 0.501 | 0.554156219314 | gnomAD-4.0.0 | 1.36846E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.87315E-05 | 0 | 0 | 1.15934E-05 | 0 |
E/K | None | None | 0.997 | N | 0.607 | 0.488 | 0.435152311215 | gnomAD-4.0.0 | 6.84232E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15942E-05 | 0 |
E/Q | None | None | 0.999 | N | 0.586 | 0.364 | 0.501247319706 | gnomAD-4.0.0 | 6.84232E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99486E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3599 | ambiguous | 0.3478 | ambiguous | -0.611 | Destabilizing | 0.995 | D | 0.644 | neutral | N | 0.486383105 | None | None | N |
E/C | 0.9618 | likely_pathogenic | 0.9615 | pathogenic | -0.536 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/D | 0.5557 | ambiguous | 0.5937 | pathogenic | -0.743 | Destabilizing | 0.965 | D | 0.46 | neutral | N | 0.518108734 | None | None | N |
E/F | 0.9743 | likely_pathogenic | 0.9735 | pathogenic | 0.139 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/G | 0.6361 | likely_pathogenic | 0.5973 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.490393725 | None | None | N |
E/H | 0.9159 | likely_pathogenic | 0.9105 | pathogenic | 0.294 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | N |
E/I | 0.6944 | likely_pathogenic | 0.6929 | pathogenic | 0.273 | Stabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/K | 0.5463 | ambiguous | 0.4796 | ambiguous | -0.319 | Destabilizing | 0.997 | D | 0.607 | neutral | N | 0.472144371 | None | None | N |
E/L | 0.7001 | likely_pathogenic | 0.7078 | pathogenic | 0.273 | Stabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/M | 0.7259 | likely_pathogenic | 0.7428 | pathogenic | 0.349 | Stabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | N |
E/N | 0.7453 | likely_pathogenic | 0.7545 | pathogenic | -0.949 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/P | 0.6351 | likely_pathogenic | 0.6251 | pathogenic | -0.002 | Destabilizing | 0.992 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/Q | 0.3436 | ambiguous | 0.3294 | benign | -0.811 | Destabilizing | 0.999 | D | 0.586 | neutral | N | 0.505064866 | None | None | N |
E/R | 0.7627 | likely_pathogenic | 0.7073 | pathogenic | 0.159 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/S | 0.6738 | likely_pathogenic | 0.6777 | pathogenic | -1.185 | Destabilizing | 0.997 | D | 0.624 | neutral | None | None | None | None | N |
E/T | 0.6324 | likely_pathogenic | 0.64 | pathogenic | -0.905 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/V | 0.4799 | ambiguous | 0.4667 | ambiguous | -0.002 | Destabilizing | 0.998 | D | 0.728 | prob.delet. | N | 0.494349227 | None | None | N |
E/W | 0.9944 | likely_pathogenic | 0.9942 | pathogenic | 0.441 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/Y | 0.9524 | likely_pathogenic | 0.9508 | pathogenic | 0.405 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.