Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33142 | 99649;99650;99651 | chr2:178537783;178537782;178537781 | chr2:179402510;179402509;179402508 |
N2AB | 31501 | 94726;94727;94728 | chr2:178537783;178537782;178537781 | chr2:179402510;179402509;179402508 |
N2A | 30574 | 91945;91946;91947 | chr2:178537783;178537782;178537781 | chr2:179402510;179402509;179402508 |
N2B | 24077 | 72454;72455;72456 | chr2:178537783;178537782;178537781 | chr2:179402510;179402509;179402508 |
Novex-1 | 24202 | 72829;72830;72831 | chr2:178537783;178537782;178537781 | chr2:179402510;179402509;179402508 |
Novex-2 | 24269 | 73030;73031;73032 | chr2:178537783;178537782;178537781 | chr2:179402510;179402509;179402508 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1338367198 | None | 0.01 | N | 0.367 | 0.136 | 0.601870671465 | gnomAD-4.0.0 | 1.59137E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1762 | likely_benign | 0.2956 | benign | -0.659 | Destabilizing | None | N | 0.181 | neutral | None | None | None | None | I |
I/C | 0.5493 | ambiguous | 0.6594 | pathogenic | -0.681 | Destabilizing | 0.704 | D | 0.33 | neutral | None | None | None | None | I |
I/D | 0.508 | ambiguous | 0.6774 | pathogenic | -0.312 | Destabilizing | 0.043 | N | 0.359 | neutral | None | None | None | None | I |
I/E | 0.3631 | ambiguous | 0.4986 | ambiguous | -0.372 | Destabilizing | 0.061 | N | 0.382 | neutral | None | None | None | None | I |
I/F | 0.1206 | likely_benign | 0.1756 | benign | -0.581 | Destabilizing | 0.11 | N | 0.329 | neutral | None | None | None | None | I |
I/G | 0.3206 | likely_benign | 0.526 | ambiguous | -0.839 | Destabilizing | 0.043 | N | 0.391 | neutral | None | None | None | None | I |
I/H | 0.2942 | likely_benign | 0.4056 | ambiguous | -0.049 | Destabilizing | 0.497 | N | 0.321 | neutral | None | None | None | None | I |
I/K | 0.2201 | likely_benign | 0.2986 | benign | -0.419 | Destabilizing | 0.002 | N | 0.373 | neutral | N | 0.448726007 | None | None | I |
I/L | 0.081 | likely_benign | 0.1045 | benign | -0.289 | Destabilizing | None | N | 0.207 | neutral | N | 0.460849942 | None | None | I |
I/M | 0.0815 | likely_benign | 0.1088 | benign | -0.521 | Destabilizing | 0.027 | N | 0.351 | neutral | D | 0.522245118 | None | None | I |
I/N | 0.1423 | likely_benign | 0.2132 | benign | -0.287 | Destabilizing | 0.001 | N | 0.329 | neutral | None | None | None | None | I |
I/P | 0.4051 | ambiguous | 0.5553 | ambiguous | -0.381 | Destabilizing | 0.387 | N | 0.356 | neutral | None | None | None | None | I |
I/Q | 0.1974 | likely_benign | 0.2705 | benign | -0.454 | Destabilizing | 0.208 | N | 0.351 | neutral | None | None | None | None | I |
I/R | 0.1815 | likely_benign | 0.2349 | benign | 0.097 | Stabilizing | 0.159 | N | 0.355 | neutral | N | 0.471949583 | None | None | I |
I/S | 0.139 | likely_benign | 0.2121 | benign | -0.72 | Destabilizing | 0.043 | N | 0.377 | neutral | None | None | None | None | I |
I/T | 0.1053 | likely_benign | 0.1746 | benign | -0.668 | Destabilizing | 0.01 | N | 0.367 | neutral | N | 0.461521946 | None | None | I |
I/V | 0.0664 | likely_benign | 0.0809 | benign | -0.381 | Destabilizing | None | N | 0.189 | neutral | N | 0.47529932 | None | None | I |
I/W | 0.6778 | likely_pathogenic | 0.7759 | pathogenic | -0.616 | Destabilizing | 0.915 | D | 0.385 | neutral | None | None | None | None | I |
I/Y | 0.3859 | ambiguous | 0.46 | ambiguous | -0.374 | Destabilizing | 0.029 | N | 0.346 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.