Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33149 | 99670;99671;99672 | chr2:178537762;178537761;178537760 | chr2:179402489;179402488;179402487 |
N2AB | 31508 | 94747;94748;94749 | chr2:178537762;178537761;178537760 | chr2:179402489;179402488;179402487 |
N2A | 30581 | 91966;91967;91968 | chr2:178537762;178537761;178537760 | chr2:179402489;179402488;179402487 |
N2B | 24084 | 72475;72476;72477 | chr2:178537762;178537761;178537760 | chr2:179402489;179402488;179402487 |
Novex-1 | 24209 | 72850;72851;72852 | chr2:178537762;178537761;178537760 | chr2:179402489;179402488;179402487 |
Novex-2 | 24276 | 73051;73052;73053 | chr2:178537762;178537761;178537760 | chr2:179402489;179402488;179402487 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/T | rs750670014 | -0.312 | 0.026 | N | 0.303 | 0.329 | 0.729516068776 | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
M/T | rs750670014 | -0.312 | 0.026 | N | 0.303 | 0.329 | 0.729516068776 | gnomAD-4.0.0 | 4.77404E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.29836E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.7346 | likely_pathogenic | 0.8071 | pathogenic | -1.803 | Destabilizing | 0.645 | D | 0.386 | neutral | None | None | None | None | N |
M/C | 0.9036 | likely_pathogenic | 0.9153 | pathogenic | -1.4 | Destabilizing | 0.999 | D | 0.472 | neutral | None | None | None | None | N |
M/D | 0.9826 | likely_pathogenic | 0.9847 | pathogenic | -0.33 | Destabilizing | 0.903 | D | 0.54 | neutral | None | None | None | None | N |
M/E | 0.8954 | likely_pathogenic | 0.9186 | pathogenic | -0.25 | Destabilizing | 0.516 | D | 0.486 | neutral | None | None | None | None | N |
M/F | 0.4003 | ambiguous | 0.387 | ambiguous | -0.707 | Destabilizing | 0.745 | D | 0.428 | neutral | None | None | None | None | N |
M/G | 0.9207 | likely_pathogenic | 0.9459 | pathogenic | -2.173 | Highly Destabilizing | 0.898 | D | 0.512 | neutral | None | None | None | None | N |
M/H | 0.8756 | likely_pathogenic | 0.8933 | pathogenic | -1.285 | Destabilizing | 0.997 | D | 0.521 | neutral | None | None | None | None | N |
M/I | 0.4951 | ambiguous | 0.5874 | pathogenic | -0.82 | Destabilizing | 0.551 | D | 0.378 | neutral | N | 0.395913029 | None | None | N |
M/K | 0.6867 | likely_pathogenic | 0.7276 | pathogenic | -0.445 | Destabilizing | 0.551 | D | 0.429 | neutral | N | 0.51770609 | None | None | N |
M/L | 0.2325 | likely_benign | 0.2933 | benign | -0.82 | Destabilizing | 0.1 | N | 0.234 | neutral | N | 0.453961255 | None | None | N |
M/N | 0.8604 | likely_pathogenic | 0.8778 | pathogenic | -0.422 | Destabilizing | 0.903 | D | 0.515 | neutral | None | None | None | None | N |
M/P | 0.9704 | likely_pathogenic | 0.9757 | pathogenic | -1.121 | Destabilizing | 0.949 | D | 0.524 | neutral | None | None | None | None | N |
M/Q | 0.6184 | likely_pathogenic | 0.6547 | pathogenic | -0.39 | Destabilizing | 0.963 | D | 0.43 | neutral | None | None | None | None | N |
M/R | 0.7092 | likely_pathogenic | 0.7599 | pathogenic | -0.168 | Destabilizing | 0.903 | D | 0.468 | neutral | D | 0.524613419 | None | None | N |
M/S | 0.7974 | likely_pathogenic | 0.8369 | pathogenic | -1.13 | Destabilizing | 0.815 | D | 0.391 | neutral | None | None | None | None | N |
M/T | 0.5789 | likely_pathogenic | 0.6663 | pathogenic | -0.917 | Destabilizing | 0.026 | N | 0.303 | neutral | N | 0.453174609 | None | None | N |
M/V | 0.1958 | likely_benign | 0.2477 | benign | -1.121 | Destabilizing | 0.363 | N | 0.373 | neutral | N | 0.411783772 | None | None | N |
M/W | 0.861 | likely_pathogenic | 0.8895 | pathogenic | -0.679 | Destabilizing | 0.999 | D | 0.489 | neutral | None | None | None | None | N |
M/Y | 0.7707 | likely_pathogenic | 0.7976 | pathogenic | -0.68 | Destabilizing | 0.991 | D | 0.48 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.