Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3315499685;99686;99687 chr2:178537747;178537746;178537745chr2:179402474;179402473;179402472
N2AB3151394762;94763;94764 chr2:178537747;178537746;178537745chr2:179402474;179402473;179402472
N2A3058691981;91982;91983 chr2:178537747;178537746;178537745chr2:179402474;179402473;179402472
N2B2408972490;72491;72492 chr2:178537747;178537746;178537745chr2:179402474;179402473;179402472
Novex-12421472865;72866;72867 chr2:178537747;178537746;178537745chr2:179402474;179402473;179402472
Novex-22428173066;73067;73068 chr2:178537747;178537746;178537745chr2:179402474;179402473;179402472
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Ig-156
  • Domain position: 54
  • Structural Position: 134
  • Q(SASA): 0.5036
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs143556947 -0.652 1.0 N 0.711 0.486 None gnomAD-2.1.1 3.21E-05 None None None None N None 1.65385E-04 0 None 0 0 None 0 None 4E-05 3.12E-05 0
R/C rs143556947 -0.652 1.0 N 0.711 0.486 None gnomAD-3.1.2 9.21E-05 None None None None N None 1.93171E-04 6.55E-05 0 0 0 None 0 0 7.35E-05 0 0
R/C rs143556947 -0.652 1.0 N 0.711 0.486 None 1000 genomes 5.99042E-04 None None None None N None 0 0 None None 0 3E-03 None None None 0 None
R/C rs143556947 -0.652 1.0 N 0.711 0.486 None gnomAD-4.0.0 2.23089E-05 None None None None N None 1.73347E-04 1.667E-05 None 0 2.22846E-05 None 1.56323E-05 0 1.52573E-05 1.09803E-05 1.60051E-05
R/G rs143556947 -1.266 1.0 N 0.691 0.422 0.673759014288 gnomAD-2.1.1 4.01E-06 None None None None N None 0 0 None 0 0 None 0 None 0 8.86E-06 0
R/G rs143556947 -1.266 1.0 N 0.691 0.422 0.673759014288 gnomAD-4.0.0 4.10532E-06 None None None None N None 0 0 None 0 0 None 0 0 5.39684E-06 0 0
R/H rs753958605 -1.4 1.0 N 0.737 0.378 0.384252928164 gnomAD-2.1.1 2.01E-05 None None None None N None 6.46E-05 0 None 0 0 None 0 None 0 3.54E-05 0
R/H rs753958605 -1.4 1.0 N 0.737 0.378 0.384252928164 gnomAD-3.1.2 6.57E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
R/H rs753958605 -1.4 1.0 N 0.737 0.378 0.384252928164 gnomAD-4.0.0 6.19728E-06 None None None None N None 0 0 None 0 0 None 0 0 7.62862E-06 0 1.60123E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.8839 likely_pathogenic 0.8893 pathogenic -0.482 Destabilizing 0.999 D 0.664 neutral None None None None N
R/C 0.5929 likely_pathogenic 0.6663 pathogenic -0.25 Destabilizing 1.0 D 0.711 prob.delet. N 0.487542889 None None N
R/D 0.9407 likely_pathogenic 0.9447 pathogenic -0.027 Destabilizing 1.0 D 0.729 prob.delet. None None None None N
R/E 0.8139 likely_pathogenic 0.8187 pathogenic 0.094 Stabilizing 0.997 D 0.702 prob.neutral None None None None N
R/F 0.8838 likely_pathogenic 0.8866 pathogenic -0.312 Destabilizing 1.0 D 0.699 prob.neutral None None None None N
R/G 0.7605 likely_pathogenic 0.7969 pathogenic -0.803 Destabilizing 1.0 D 0.691 prob.neutral N 0.452902463 None None N
R/H 0.328 likely_benign 0.362 ambiguous -1.295 Destabilizing 1.0 D 0.737 prob.delet. N 0.495117232 None None N
R/I 0.7142 likely_pathogenic 0.7102 pathogenic 0.375 Stabilizing 0.999 D 0.708 prob.delet. None None None None N
R/K 0.2755 likely_benign 0.2913 benign -0.52 Destabilizing 0.979 D 0.538 neutral None None None None N
R/L 0.6347 likely_pathogenic 0.6634 pathogenic 0.375 Stabilizing 1.0 D 0.691 prob.neutral N 0.516935298 None None N
R/M 0.7557 likely_pathogenic 0.7645 pathogenic 0.07 Stabilizing 1.0 D 0.694 prob.neutral None None None None N
R/N 0.8783 likely_pathogenic 0.8898 pathogenic 0.04 Stabilizing 1.0 D 0.743 deleterious None None None None N
R/P 0.9468 likely_pathogenic 0.9512 pathogenic 0.111 Stabilizing 1.0 D 0.701 prob.neutral N 0.489998424 None None N
R/Q 0.2877 likely_benign 0.3041 benign -0.09 Destabilizing 1.0 D 0.742 deleterious None None None None N
R/S 0.8977 likely_pathogenic 0.9089 pathogenic -0.586 Destabilizing 1.0 D 0.709 prob.delet. N 0.489516624 None None N
R/T 0.8008 likely_pathogenic 0.8021 pathogenic -0.285 Destabilizing 1.0 D 0.7 prob.neutral None None None None N
R/V 0.8069 likely_pathogenic 0.8152 pathogenic 0.111 Stabilizing 0.999 D 0.705 prob.neutral None None None None N
R/W 0.5857 likely_pathogenic 0.6119 pathogenic -0.055 Destabilizing 1.0 D 0.716 prob.delet. None None None None N
R/Y 0.7576 likely_pathogenic 0.7757 pathogenic 0.256 Stabilizing 0.999 D 0.715 prob.delet. None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.