Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33162 | 99709;99710;99711 | chr2:178537723;178537722;178537721 | chr2:179402450;179402449;179402448 |
N2AB | 31521 | 94786;94787;94788 | chr2:178537723;178537722;178537721 | chr2:179402450;179402449;179402448 |
N2A | 30594 | 92005;92006;92007 | chr2:178537723;178537722;178537721 | chr2:179402450;179402449;179402448 |
N2B | 24097 | 72514;72515;72516 | chr2:178537723;178537722;178537721 | chr2:179402450;179402449;179402448 |
Novex-1 | 24222 | 72889;72890;72891 | chr2:178537723;178537722;178537721 | chr2:179402450;179402449;179402448 |
Novex-2 | 24289 | 73090;73091;73092 | chr2:178537723;178537722;178537721 | chr2:179402450;179402449;179402448 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.717 | 0.452 | 0.260735089382 | gnomAD-4.0.0 | 6.84224E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99478E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2704 | likely_benign | 0.2791 | benign | -0.999 | Destabilizing | 0.999 | D | 0.519 | neutral | N | 0.457323195 | None | None | N |
T/C | 0.7941 | likely_pathogenic | 0.7765 | pathogenic | -1.188 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
T/D | 0.9625 | likely_pathogenic | 0.953 | pathogenic | -2.286 | Highly Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/E | 0.947 | likely_pathogenic | 0.9288 | pathogenic | -2.137 | Highly Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/F | 0.9613 | likely_pathogenic | 0.9522 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
T/G | 0.7208 | likely_pathogenic | 0.7202 | pathogenic | -1.344 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/H | 0.9567 | likely_pathogenic | 0.9439 | pathogenic | -1.467 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
T/I | 0.8075 | likely_pathogenic | 0.7613 | pathogenic | -0.122 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.451090656 | None | None | N |
T/K | 0.9426 | likely_pathogenic | 0.9223 | pathogenic | -0.938 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | N | 0.377918262 | None | None | N |
T/L | 0.462 | ambiguous | 0.4663 | ambiguous | -0.122 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
T/M | 0.3391 | likely_benign | 0.351 | ambiguous | -0.108 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
T/N | 0.6859 | likely_pathogenic | 0.6453 | pathogenic | -1.632 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
T/P | 0.5862 | likely_pathogenic | 0.5725 | pathogenic | -0.384 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | N | 0.424730774 | None | None | N |
T/Q | 0.9124 | likely_pathogenic | 0.9017 | pathogenic | -1.573 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
T/R | 0.92 | likely_pathogenic | 0.8947 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | N | 0.403912784 | None | None | N |
T/S | 0.5048 | ambiguous | 0.4948 | ambiguous | -1.677 | Destabilizing | 0.998 | D | 0.538 | neutral | N | 0.410067965 | None | None | N |
T/V | 0.5572 | ambiguous | 0.5117 | ambiguous | -0.384 | Destabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | N |
T/W | 0.9931 | likely_pathogenic | 0.9899 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
T/Y | 0.9743 | likely_pathogenic | 0.9657 | pathogenic | -0.563 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.