Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33164 | 99715;99716;99717 | chr2:178537717;178537716;178537715 | chr2:179402444;179402443;179402442 |
N2AB | 31523 | 94792;94793;94794 | chr2:178537717;178537716;178537715 | chr2:179402444;179402443;179402442 |
N2A | 30596 | 92011;92012;92013 | chr2:178537717;178537716;178537715 | chr2:179402444;179402443;179402442 |
N2B | 24099 | 72520;72521;72522 | chr2:178537717;178537716;178537715 | chr2:179402444;179402443;179402442 |
Novex-1 | 24224 | 72895;72896;72897 | chr2:178537717;178537716;178537715 | chr2:179402444;179402443;179402442 |
Novex-2 | 24291 | 73096;73097;73098 | chr2:178537717;178537716;178537715 | chr2:179402444;179402443;179402442 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs753191182 | -0.213 | 1.0 | N | 0.645 | 0.274 | 0.390220360785 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 0 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.56E-05 | 0 |
E/Q | rs753191182 | -0.213 | 1.0 | N | 0.645 | 0.274 | 0.390220360785 | gnomAD-4.0.0 | 6.84223E-07 | None | None | None | None | N | None | 0 | 2.23694E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2493 | likely_benign | 0.3312 | benign | -0.525 | Destabilizing | 0.998 | D | 0.612 | neutral | N | 0.429625745 | None | None | N |
E/C | 0.9309 | likely_pathogenic | 0.9414 | pathogenic | -0.037 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/D | 0.2284 | likely_benign | 0.2901 | benign | -0.463 | Destabilizing | 0.988 | D | 0.437 | neutral | N | 0.447576788 | None | None | N |
E/F | 0.8709 | likely_pathogenic | 0.9003 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
E/G | 0.2675 | likely_benign | 0.3095 | benign | -0.744 | Destabilizing | 1.0 | D | 0.652 | neutral | N | 0.462007522 | None | None | N |
E/H | 0.7462 | likely_pathogenic | 0.7705 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/I | 0.6127 | likely_pathogenic | 0.7165 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/K | 0.3524 | ambiguous | 0.4073 | ambiguous | 0.177 | Stabilizing | 0.999 | D | 0.586 | neutral | N | 0.4181766 | None | None | N |
E/L | 0.5976 | likely_pathogenic | 0.6621 | pathogenic | 0.028 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
E/M | 0.5875 | likely_pathogenic | 0.6772 | pathogenic | 0.279 | Stabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
E/N | 0.4141 | ambiguous | 0.4817 | ambiguous | -0.135 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/P | 0.9811 | likely_pathogenic | 0.9765 | pathogenic | -0.136 | Destabilizing | 0.997 | D | 0.671 | neutral | None | None | None | None | N |
E/Q | 0.2229 | likely_benign | 0.2554 | benign | -0.102 | Destabilizing | 1.0 | D | 0.645 | neutral | N | 0.38269859 | None | None | N |
E/R | 0.5321 | ambiguous | 0.5503 | ambiguous | 0.347 | Stabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/S | 0.3696 | ambiguous | 0.4399 | ambiguous | -0.319 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
E/T | 0.3767 | ambiguous | 0.4797 | ambiguous | -0.141 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/V | 0.3901 | ambiguous | 0.4947 | ambiguous | -0.136 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.451849244 | None | None | N |
E/W | 0.9725 | likely_pathogenic | 0.9759 | pathogenic | -0.255 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/Y | 0.8085 | likely_pathogenic | 0.8308 | pathogenic | -0.175 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.