Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3317 | 10174;10175;10176 | chr2:178764566;178764565;178764564 | chr2:179629293;179629292;179629291 |
N2AB | 3317 | 10174;10175;10176 | chr2:178764566;178764565;178764564 | chr2:179629293;179629292;179629291 |
N2A | 3317 | 10174;10175;10176 | chr2:178764566;178764565;178764564 | chr2:179629293;179629292;179629291 |
N2B | 3271 | 10036;10037;10038 | chr2:178764566;178764565;178764564 | chr2:179629293;179629292;179629291 |
Novex-1 | 3271 | 10036;10037;10038 | chr2:178764566;178764565;178764564 | chr2:179629293;179629292;179629291 |
Novex-2 | 3271 | 10036;10037;10038 | chr2:178764566;178764565;178764564 | chr2:179629293;179629292;179629291 |
Novex-3 | 3317 | 10174;10175;10176 | chr2:178764566;178764565;178764564 | chr2:179629293;179629292;179629291 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs768476150 | 0.364 | 0.999 | D | 0.605 | 0.554 | 0.614776886339 | gnomAD-2.1.1 | 1.99E-05 | None | None | None | None | I | None | 0 | 2.89E-05 | None | 0 | 0 | None | 0 | None | 0 | 3.54E-05 | 0 |
Y/C | rs768476150 | 0.364 | 0.999 | D | 0.605 | 0.554 | 0.614776886339 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 4.77555E-04 |
Y/C | rs768476150 | 0.364 | 0.999 | D | 0.605 | 0.554 | 0.614776886339 | gnomAD-4.0.0 | 1.28053E-05 | None | None | None | None | I | None | 0 | 1.69434E-05 | None | 0 | 2.42377E-05 | None | 0 | 0 | 1.67417E-05 | 0 | 2.84236E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7238 | likely_pathogenic | 0.5524 | ambiguous | -0.38 | Destabilizing | 0.91 | D | 0.563 | neutral | None | None | None | None | I |
Y/C | 0.3456 | ambiguous | 0.2188 | benign | 0.261 | Stabilizing | 0.999 | D | 0.605 | neutral | D | 0.551837373 | None | None | I |
Y/D | 0.4888 | ambiguous | 0.4236 | ambiguous | 0.813 | Stabilizing | 0.982 | D | 0.595 | neutral | D | 0.56575136 | None | None | I |
Y/E | 0.8578 | likely_pathogenic | 0.7706 | pathogenic | 0.781 | Stabilizing | 0.986 | D | 0.527 | neutral | None | None | None | None | I |
Y/F | 0.1559 | likely_benign | 0.1202 | benign | -0.237 | Destabilizing | 0.99 | D | 0.568 | neutral | N | 0.493014267 | None | None | I |
Y/G | 0.6877 | likely_pathogenic | 0.5415 | ambiguous | -0.539 | Destabilizing | 0.91 | D | 0.552 | neutral | None | None | None | None | I |
Y/H | 0.3819 | ambiguous | 0.2898 | benign | 0.333 | Stabilizing | 0.997 | D | 0.596 | neutral | N | 0.507580693 | None | None | I |
Y/I | 0.806 | likely_pathogenic | 0.6811 | pathogenic | None | Stabilizing | 0.993 | D | 0.597 | neutral | None | None | None | None | I |
Y/K | 0.865 | likely_pathogenic | 0.8151 | pathogenic | 0.347 | Stabilizing | 0.986 | D | 0.537 | neutral | None | None | None | None | I |
Y/L | 0.721 | likely_pathogenic | 0.6556 | pathogenic | None | Stabilizing | 0.953 | D | 0.628 | neutral | None | None | None | None | I |
Y/M | 0.8599 | likely_pathogenic | 0.761 | pathogenic | 0.015 | Stabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | I |
Y/N | 0.3867 | ambiguous | 0.2952 | benign | 0.152 | Stabilizing | 0.982 | D | 0.581 | neutral | N | 0.507624979 | None | None | I |
Y/P | 0.9819 | likely_pathogenic | 0.9749 | pathogenic | -0.107 | Destabilizing | 0.993 | D | 0.607 | neutral | None | None | None | None | I |
Y/Q | 0.8085 | likely_pathogenic | 0.6967 | pathogenic | 0.204 | Stabilizing | 0.993 | D | 0.591 | neutral | None | None | None | None | I |
Y/R | 0.6957 | likely_pathogenic | 0.6186 | pathogenic | 0.512 | Stabilizing | 0.986 | D | 0.589 | neutral | None | None | None | None | I |
Y/S | 0.4031 | ambiguous | 0.2294 | benign | -0.18 | Destabilizing | 0.322 | N | 0.561 | neutral | N | 0.495615845 | None | None | I |
Y/T | 0.7414 | likely_pathogenic | 0.573 | pathogenic | -0.122 | Destabilizing | 0.973 | D | 0.515 | neutral | None | None | None | None | I |
Y/V | 0.679 | likely_pathogenic | 0.5168 | ambiguous | -0.107 | Destabilizing | 0.986 | D | 0.567 | neutral | None | None | None | None | I |
Y/W | 0.6679 | likely_pathogenic | 0.616 | pathogenic | -0.464 | Destabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.