Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33176 | 99751;99752;99753 | chr2:178537681;178537680;178537679 | chr2:179402408;179402407;179402406 |
N2AB | 31535 | 94828;94829;94830 | chr2:178537681;178537680;178537679 | chr2:179402408;179402407;179402406 |
N2A | 30608 | 92047;92048;92049 | chr2:178537681;178537680;178537679 | chr2:179402408;179402407;179402406 |
N2B | 24111 | 72556;72557;72558 | chr2:178537681;178537680;178537679 | chr2:179402408;179402407;179402406 |
Novex-1 | 24236 | 72931;72932;72933 | chr2:178537681;178537680;178537679 | chr2:179402408;179402407;179402406 |
Novex-2 | 24303 | 73132;73133;73134 | chr2:178537681;178537680;178537679 | chr2:179402408;179402407;179402406 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.005 | N | 0.165 | 0.187 | 0.486422812247 | gnomAD-4.0.0 | 6.84222E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99465E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0747 | likely_benign | 0.083 | benign | -0.809 | Destabilizing | None | N | 0.098 | neutral | D | 0.527827083 | None | None | N |
T/C | 0.3244 | likely_benign | 0.3696 | ambiguous | -0.71 | Destabilizing | 0.95 | D | 0.512 | neutral | None | None | None | None | N |
T/D | 0.4281 | ambiguous | 0.5181 | ambiguous | -1.253 | Destabilizing | 0.642 | D | 0.509 | neutral | None | None | None | None | N |
T/E | 0.2789 | likely_benign | 0.3134 | benign | -1.212 | Destabilizing | 0.457 | N | 0.517 | neutral | None | None | None | None | N |
T/F | 0.2434 | likely_benign | 0.3222 | benign | -0.736 | Destabilizing | 0.917 | D | 0.609 | neutral | None | None | None | None | N |
T/G | 0.2256 | likely_benign | 0.2659 | benign | -1.109 | Destabilizing | 0.514 | D | 0.601 | neutral | None | None | None | None | N |
T/H | 0.2279 | likely_benign | 0.2565 | benign | -1.43 | Destabilizing | 0.99 | D | 0.581 | neutral | None | None | None | None | N |
T/I | 0.1184 | likely_benign | 0.1659 | benign | -0.086 | Destabilizing | 0.005 | N | 0.165 | neutral | N | 0.511974983 | None | None | N |
T/K | 0.1637 | likely_benign | 0.1678 | benign | -1.019 | Destabilizing | 0.54 | D | 0.52 | neutral | None | None | None | None | N |
T/L | 0.1006 | likely_benign | 0.1259 | benign | -0.086 | Destabilizing | 0.002 | N | 0.171 | neutral | None | None | None | None | N |
T/M | 0.0905 | likely_benign | 0.1089 | benign | 0.201 | Stabilizing | 0.805 | D | 0.523 | neutral | None | None | None | None | N |
T/N | 0.1182 | likely_benign | 0.1452 | benign | -1.194 | Destabilizing | 0.575 | D | 0.458 | neutral | D | 0.533638334 | None | None | N |
T/P | 0.7253 | likely_pathogenic | 0.7693 | pathogenic | -0.294 | Destabilizing | 0.575 | D | 0.513 | neutral | D | 0.532491265 | None | None | N |
T/Q | 0.1797 | likely_benign | 0.192 | benign | -1.331 | Destabilizing | 0.797 | D | 0.527 | neutral | None | None | None | None | N |
T/R | 0.1332 | likely_benign | 0.1402 | benign | -0.787 | Destabilizing | 0.957 | D | 0.525 | neutral | None | None | None | None | N |
T/S | 0.0983 | likely_benign | 0.1046 | benign | -1.325 | Destabilizing | 0.013 | N | 0.377 | neutral | N | 0.441650893 | None | None | N |
T/V | 0.0994 | likely_benign | 0.123 | benign | -0.294 | Destabilizing | 0.001 | N | 0.113 | neutral | None | None | None | None | N |
T/W | 0.6155 | likely_pathogenic | 0.6885 | pathogenic | -0.764 | Destabilizing | 0.996 | D | 0.608 | neutral | None | None | None | None | N |
T/Y | 0.302 | likely_benign | 0.3731 | ambiguous | -0.496 | Destabilizing | 0.957 | D | 0.619 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.