Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33178 | 99757;99758;99759 | chr2:178537675;178537674;178537673 | chr2:179402402;179402401;179402400 |
N2AB | 31537 | 94834;94835;94836 | chr2:178537675;178537674;178537673 | chr2:179402402;179402401;179402400 |
N2A | 30610 | 92053;92054;92055 | chr2:178537675;178537674;178537673 | chr2:179402402;179402401;179402400 |
N2B | 24113 | 72562;72563;72564 | chr2:178537675;178537674;178537673 | chr2:179402402;179402401;179402400 |
Novex-1 | 24238 | 72937;72938;72939 | chr2:178537675;178537674;178537673 | chr2:179402402;179402401;179402400 |
Novex-2 | 24305 | 73138;73139;73140 | chr2:178537675;178537674;178537673 | chr2:179402402;179402401;179402400 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs371017136 | 0.8 | 0.812 | N | 0.507 | 0.341 | None | gnomAD-2.1.1 | 7.13E-06 | None | None | None | None | I | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs371017136 | 0.8 | 0.812 | N | 0.507 | 0.341 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs371017136 | 0.8 | 0.812 | N | 0.507 | 0.341 | None | gnomAD-4.0.0 | 1.97122E-05 | None | None | None | None | I | None | 7.23554E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1948 | likely_benign | 0.2616 | benign | -0.045 | Destabilizing | 0.7 | D | 0.514 | neutral | N | 0.475667466 | None | None | I |
E/C | 0.9016 | likely_pathogenic | 0.9484 | pathogenic | -0.124 | Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | I |
E/D | 0.066 | likely_benign | 0.0815 | benign | -0.317 | Destabilizing | None | N | 0.3 | neutral | N | 0.469992287 | None | None | I |
E/F | 0.8618 | likely_pathogenic | 0.9326 | pathogenic | -0.064 | Destabilizing | 0.998 | D | 0.634 | neutral | None | None | None | None | I |
E/G | 0.2147 | likely_benign | 0.2997 | benign | -0.174 | Destabilizing | 0.886 | D | 0.424 | neutral | N | 0.498544326 | None | None | I |
E/H | 0.6198 | likely_pathogenic | 0.7435 | pathogenic | 0.485 | Stabilizing | 0.997 | D | 0.563 | neutral | None | None | None | None | I |
E/I | 0.5062 | ambiguous | 0.6465 | pathogenic | 0.24 | Stabilizing | 0.95 | D | 0.642 | neutral | None | None | None | None | I |
E/K | 0.3151 | likely_benign | 0.4071 | ambiguous | 0.463 | Stabilizing | 0.812 | D | 0.507 | neutral | N | 0.496349383 | None | None | I |
E/L | 0.5598 | ambiguous | 0.6966 | pathogenic | 0.24 | Stabilizing | 0.95 | D | 0.616 | neutral | None | None | None | None | I |
E/M | 0.6239 | likely_pathogenic | 0.7591 | pathogenic | 0.056 | Stabilizing | 0.975 | D | 0.599 | neutral | None | None | None | None | I |
E/N | 0.2332 | likely_benign | 0.3306 | benign | 0.183 | Stabilizing | 0.686 | D | 0.524 | neutral | None | None | None | None | I |
E/P | 0.5759 | likely_pathogenic | 0.6618 | pathogenic | 0.163 | Stabilizing | 0.739 | D | 0.527 | neutral | None | None | None | None | I |
E/Q | 0.2647 | likely_benign | 0.3437 | ambiguous | 0.2 | Stabilizing | 0.957 | D | 0.505 | neutral | D | 0.52584557 | None | None | I |
E/R | 0.4858 | ambiguous | 0.5947 | pathogenic | 0.684 | Stabilizing | 0.976 | D | 0.563 | neutral | None | None | None | None | I |
E/S | 0.2128 | likely_benign | 0.2935 | benign | 0.057 | Stabilizing | 0.756 | D | 0.495 | neutral | None | None | None | None | I |
E/T | 0.291 | likely_benign | 0.3915 | ambiguous | 0.17 | Stabilizing | 0.937 | D | 0.492 | neutral | None | None | None | None | I |
E/V | 0.3273 | likely_benign | 0.4416 | ambiguous | 0.163 | Stabilizing | 0.911 | D | 0.551 | neutral | N | 0.519535673 | None | None | I |
E/W | 0.9546 | likely_pathogenic | 0.979 | pathogenic | -0.006 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/Y | 0.7502 | likely_pathogenic | 0.8597 | pathogenic | 0.164 | Stabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.