Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33179 | 99760;99761;99762 | chr2:178537672;178537671;178537670 | chr2:179402399;179402398;179402397 |
N2AB | 31538 | 94837;94838;94839 | chr2:178537672;178537671;178537670 | chr2:179402399;179402398;179402397 |
N2A | 30611 | 92056;92057;92058 | chr2:178537672;178537671;178537670 | chr2:179402399;179402398;179402397 |
N2B | 24114 | 72565;72566;72567 | chr2:178537672;178537671;178537670 | chr2:179402399;179402398;179402397 |
Novex-1 | 24239 | 72940;72941;72942 | chr2:178537672;178537671;178537670 | chr2:179402399;179402398;179402397 |
Novex-2 | 24306 | 73141;73142;73143 | chr2:178537672;178537671;178537670 | chr2:179402399;179402398;179402397 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs576759867 | -0.626 | 0.001 | N | 0.261 | 0.228 | 0.379366414296 | gnomAD-2.1.1 | 6.06E-05 | None | None | None | None | I | None | 8.27E-05 | 1.98166E-04 | None | 0 | 0 | None | 2.28773E-04 | None | 0 | 7.8E-06 | 0 |
V/A | rs576759867 | -0.626 | 0.001 | N | 0.261 | 0.228 | 0.379366414296 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 2.41E-05 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs576759867 | -0.626 | 0.001 | N | 0.261 | 0.228 | 0.379366414296 | gnomAD-4.0.0 | 2.97466E-05 | None | None | None | None | I | None | 8.01303E-05 | 1.50105E-04 | None | 0 | 2.22806E-05 | None | 0 | 3.28947E-04 | 6.78087E-06 | 1.86637E-04 | 8.00589E-05 |
V/D | None | -0.31 | 0.976 | N | 0.599 | 0.522 | 0.775623232837 | gnomAD-2.1.1 | 2.81E-05 | None | None | None | None | I | None | 0 | 2.0304E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/D | None | -0.31 | 0.976 | N | 0.599 | 0.522 | 0.775623232837 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/D | None | -0.31 | 0.976 | N | 0.599 | 0.522 | 0.775623232837 | gnomAD-4.0.0 | 4.95777E-06 | None | None | None | None | I | None | 1.33551E-05 | 1.16748E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/F | rs1452847129 | None | 0.989 | N | 0.491 | 0.401 | 0.667001395416 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/F | rs1452847129 | None | 0.989 | N | 0.491 | 0.401 | 0.667001395416 | gnomAD-4.0.0 | 6.57177E-06 | None | None | None | None | I | None | 2.4122E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/G | rs576759867 | None | 0.793 | N | 0.53 | 0.393 | 0.69196344514 | gnomAD-4.0.0 | 6.84213E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99459E-07 | 0 | 0 |
V/I | rs1452847129 | -0.307 | 0.128 | N | 0.412 | 0.143 | 0.448000600372 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.86E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.0975 | likely_benign | 0.1234 | benign | -0.31 | Destabilizing | 0.001 | N | 0.261 | neutral | N | 0.437415722 | None | None | I |
V/C | 0.6914 | likely_pathogenic | 0.7534 | pathogenic | -0.7 | Destabilizing | 0.996 | D | 0.517 | neutral | None | None | None | None | I |
V/D | 0.4815 | ambiguous | 0.5495 | ambiguous | -0.379 | Destabilizing | 0.976 | D | 0.599 | neutral | N | 0.497572975 | None | None | I |
V/E | 0.4269 | ambiguous | 0.4669 | ambiguous | -0.504 | Destabilizing | 0.809 | D | 0.531 | neutral | None | None | None | None | I |
V/F | 0.1407 | likely_benign | 0.171 | benign | -0.687 | Destabilizing | 0.989 | D | 0.491 | neutral | N | 0.489076694 | None | None | I |
V/G | 0.2406 | likely_benign | 0.2895 | benign | -0.382 | Destabilizing | 0.793 | D | 0.53 | neutral | N | 0.515993936 | None | None | I |
V/H | 0.5836 | likely_pathogenic | 0.6346 | pathogenic | 0.02 | Stabilizing | 0.997 | D | 0.627 | neutral | None | None | None | None | I |
V/I | 0.0937 | likely_benign | 0.1037 | benign | -0.272 | Destabilizing | 0.128 | N | 0.412 | neutral | N | 0.458004425 | None | None | I |
V/K | 0.5469 | ambiguous | 0.5981 | pathogenic | -0.373 | Destabilizing | 0.903 | D | 0.535 | neutral | None | None | None | None | I |
V/L | 0.2694 | likely_benign | 0.3243 | benign | -0.272 | Destabilizing | 0.128 | N | 0.417 | neutral | N | 0.440168026 | None | None | I |
V/M | 0.1581 | likely_benign | 0.1947 | benign | -0.466 | Destabilizing | 0.989 | D | 0.446 | neutral | None | None | None | None | I |
V/N | 0.2914 | likely_benign | 0.3309 | benign | -0.136 | Destabilizing | 0.736 | D | 0.615 | neutral | None | None | None | None | I |
V/P | 0.9202 | likely_pathogenic | 0.9411 | pathogenic | -0.254 | Destabilizing | 0.736 | D | 0.573 | neutral | None | None | None | None | I |
V/Q | 0.4347 | ambiguous | 0.4779 | ambiguous | -0.377 | Destabilizing | 0.93 | D | 0.601 | neutral | None | None | None | None | I |
V/R | 0.469 | ambiguous | 0.5297 | ambiguous | 0.118 | Stabilizing | 0.976 | D | 0.611 | neutral | None | None | None | None | I |
V/S | 0.1708 | likely_benign | 0.2149 | benign | -0.436 | Destabilizing | 0.604 | D | 0.523 | neutral | None | None | None | None | I |
V/T | 0.1697 | likely_benign | 0.2056 | benign | -0.469 | Destabilizing | 0.551 | D | 0.375 | neutral | None | None | None | None | I |
V/W | 0.8264 | likely_pathogenic | 0.8655 | pathogenic | -0.751 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
V/Y | 0.4908 | ambiguous | 0.568 | pathogenic | -0.462 | Destabilizing | 0.992 | D | 0.486 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.