Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3317999760;99761;99762 chr2:178537672;178537671;178537670chr2:179402399;179402398;179402397
N2AB3153894837;94838;94839 chr2:178537672;178537671;178537670chr2:179402399;179402398;179402397
N2A3061192056;92057;92058 chr2:178537672;178537671;178537670chr2:179402399;179402398;179402397
N2B2411472565;72566;72567 chr2:178537672;178537671;178537670chr2:179402399;179402398;179402397
Novex-12423972940;72941;72942 chr2:178537672;178537671;178537670chr2:179402399;179402398;179402397
Novex-22430673141;73142;73143 chr2:178537672;178537671;178537670chr2:179402399;179402398;179402397
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTT
  • RefSeq wild type template codon: CAA
  • Domain: Ig-156
  • Domain position: 79
  • Structural Position: 163
  • Q(SASA): 0.3273
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/A rs576759867 -0.626 0.001 N 0.261 0.228 0.379366414296 gnomAD-2.1.1 6.06E-05 None None None None I None 8.27E-05 1.98166E-04 None 0 0 None 2.28773E-04 None 0 7.8E-06 0
V/A rs576759867 -0.626 0.001 N 0.261 0.228 0.379366414296 gnomAD-3.1.2 1.97E-05 None None None None I None 2.41E-05 6.56E-05 0 0 0 None 0 0 1.47E-05 0 0
V/A rs576759867 -0.626 0.001 N 0.261 0.228 0.379366414296 gnomAD-4.0.0 2.97466E-05 None None None None I None 8.01303E-05 1.50105E-04 None 0 2.22806E-05 None 0 3.28947E-04 6.78087E-06 1.86637E-04 8.00589E-05
V/D None -0.31 0.976 N 0.599 0.522 0.775623232837 gnomAD-2.1.1 2.81E-05 None None None None I None 0 2.0304E-04 None 0 0 None 0 None 0 0 0
V/D None -0.31 0.976 N 0.599 0.522 0.775623232837 gnomAD-3.1.2 6.57E-06 None None None None I None 2.41E-05 0 0 0 0 None 0 0 0 0 0
V/D None -0.31 0.976 N 0.599 0.522 0.775623232837 gnomAD-4.0.0 4.95777E-06 None None None None I None 1.33551E-05 1.16748E-04 None 0 0 None 0 0 0 0 0
V/F rs1452847129 None 0.989 N 0.491 0.401 0.667001395416 gnomAD-3.1.2 6.57E-06 None None None None I None 2.41E-05 0 0 0 0 None 0 0 0 0 0
V/F rs1452847129 None 0.989 N 0.491 0.401 0.667001395416 gnomAD-4.0.0 6.57177E-06 None None None None I None 2.4122E-05 0 None 0 0 None 0 0 0 0 0
V/G rs576759867 None 0.793 N 0.53 0.393 0.69196344514 gnomAD-4.0.0 6.84213E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99459E-07 0 0
V/I rs1452847129 -0.307 0.128 N 0.412 0.143 0.448000600372 gnomAD-2.1.1 4.02E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.86E-06 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.0975 likely_benign 0.1234 benign -0.31 Destabilizing 0.001 N 0.261 neutral N 0.437415722 None None I
V/C 0.6914 likely_pathogenic 0.7534 pathogenic -0.7 Destabilizing 0.996 D 0.517 neutral None None None None I
V/D 0.4815 ambiguous 0.5495 ambiguous -0.379 Destabilizing 0.976 D 0.599 neutral N 0.497572975 None None I
V/E 0.4269 ambiguous 0.4669 ambiguous -0.504 Destabilizing 0.809 D 0.531 neutral None None None None I
V/F 0.1407 likely_benign 0.171 benign -0.687 Destabilizing 0.989 D 0.491 neutral N 0.489076694 None None I
V/G 0.2406 likely_benign 0.2895 benign -0.382 Destabilizing 0.793 D 0.53 neutral N 0.515993936 None None I
V/H 0.5836 likely_pathogenic 0.6346 pathogenic 0.02 Stabilizing 0.997 D 0.627 neutral None None None None I
V/I 0.0937 likely_benign 0.1037 benign -0.272 Destabilizing 0.128 N 0.412 neutral N 0.458004425 None None I
V/K 0.5469 ambiguous 0.5981 pathogenic -0.373 Destabilizing 0.903 D 0.535 neutral None None None None I
V/L 0.2694 likely_benign 0.3243 benign -0.272 Destabilizing 0.128 N 0.417 neutral N 0.440168026 None None I
V/M 0.1581 likely_benign 0.1947 benign -0.466 Destabilizing 0.989 D 0.446 neutral None None None None I
V/N 0.2914 likely_benign 0.3309 benign -0.136 Destabilizing 0.736 D 0.615 neutral None None None None I
V/P 0.9202 likely_pathogenic 0.9411 pathogenic -0.254 Destabilizing 0.736 D 0.573 neutral None None None None I
V/Q 0.4347 ambiguous 0.4779 ambiguous -0.377 Destabilizing 0.93 D 0.601 neutral None None None None I
V/R 0.469 ambiguous 0.5297 ambiguous 0.118 Stabilizing 0.976 D 0.611 neutral None None None None I
V/S 0.1708 likely_benign 0.2149 benign -0.436 Destabilizing 0.604 D 0.523 neutral None None None None I
V/T 0.1697 likely_benign 0.2056 benign -0.469 Destabilizing 0.551 D 0.375 neutral None None None None I
V/W 0.8264 likely_pathogenic 0.8655 pathogenic -0.751 Destabilizing 0.999 D 0.669 neutral None None None None I
V/Y 0.4908 ambiguous 0.568 pathogenic -0.462 Destabilizing 0.992 D 0.486 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.