Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33204 | 99835;99836;99837 | chr2:178537597;178537596;178537595 | chr2:179402324;179402323;179402322 |
N2AB | 31563 | 94912;94913;94914 | chr2:178537597;178537596;178537595 | chr2:179402324;179402323;179402322 |
N2A | 30636 | 92131;92132;92133 | chr2:178537597;178537596;178537595 | chr2:179402324;179402323;179402322 |
N2B | 24139 | 72640;72641;72642 | chr2:178537597;178537596;178537595 | chr2:179402324;179402323;179402322 |
Novex-1 | 24264 | 73015;73016;73017 | chr2:178537597;178537596;178537595 | chr2:179402324;179402323;179402322 |
Novex-2 | 24331 | 73216;73217;73218 | chr2:178537597;178537596;178537595 | chr2:179402324;179402323;179402322 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.941 | N | 0.523 | 0.219 | 0.417843521124 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
E/K | rs1490008675 | 0.445 | 0.996 | N | 0.644 | 0.457 | 0.388010793773 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
E/K | rs1490008675 | 0.445 | 0.996 | N | 0.644 | 0.457 | 0.388010793773 | gnomAD-4.0.0 | 2.05285E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31879E-05 | 1.65678E-05 |
E/V | None | None | 0.996 | N | 0.698 | 0.545 | 0.53754225682 | gnomAD-4.0.0 | 1.59162E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85891E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.314 | likely_benign | 0.3331 | benign | -0.041 | Destabilizing | 0.992 | D | 0.636 | neutral | N | 0.508254313 | None | None | N |
E/C | 0.9507 | likely_pathogenic | 0.9594 | pathogenic | -0.284 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
E/D | 0.1827 | likely_benign | 0.1882 | benign | -0.328 | Destabilizing | 0.941 | D | 0.523 | neutral | N | 0.440413168 | None | None | N |
E/F | 0.9424 | likely_pathogenic | 0.9471 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
E/G | 0.1921 | likely_benign | 0.1993 | benign | -0.161 | Destabilizing | 0.999 | D | 0.645 | neutral | N | 0.508947747 | None | None | N |
E/H | 0.7683 | likely_pathogenic | 0.7464 | pathogenic | 0.615 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/I | 0.749 | likely_pathogenic | 0.7796 | pathogenic | 0.22 | Stabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | N |
E/K | 0.3049 | likely_benign | 0.2931 | benign | 0.374 | Stabilizing | 0.996 | D | 0.644 | neutral | N | 0.470389358 | None | None | N |
E/L | 0.744 | likely_pathogenic | 0.7718 | pathogenic | 0.22 | Stabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/M | 0.7603 | likely_pathogenic | 0.7855 | pathogenic | -0.06 | Destabilizing | 0.997 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/N | 0.4041 | ambiguous | 0.388 | ambiguous | 0.101 | Stabilizing | 0.996 | D | 0.667 | neutral | None | None | None | None | N |
E/P | 0.6258 | likely_pathogenic | 0.6019 | pathogenic | 0.151 | Stabilizing | 0.987 | D | 0.655 | neutral | None | None | None | None | N |
E/Q | 0.2566 | likely_benign | 0.2474 | benign | 0.109 | Stabilizing | 0.998 | D | 0.575 | neutral | N | 0.477931406 | None | None | N |
E/R | 0.4885 | ambiguous | 0.469 | ambiguous | 0.662 | Stabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
E/S | 0.3666 | ambiguous | 0.3595 | ambiguous | -0.044 | Destabilizing | 0.994 | D | 0.622 | neutral | None | None | None | None | N |
E/T | 0.4512 | ambiguous | 0.462 | ambiguous | 0.062 | Stabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
E/V | 0.5013 | ambiguous | 0.5534 | ambiguous | 0.151 | Stabilizing | 0.996 | D | 0.698 | prob.neutral | N | 0.507907597 | None | None | N |
E/W | 0.9673 | likely_pathogenic | 0.9655 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/Y | 0.8574 | likely_pathogenic | 0.8644 | pathogenic | 0.186 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.