Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33212 | 99859;99860;99861 | chr2:178537573;178537572;178537571 | chr2:179402300;179402299;179402298 |
N2AB | 31571 | 94936;94937;94938 | chr2:178537573;178537572;178537571 | chr2:179402300;179402299;179402298 |
N2A | 30644 | 92155;92156;92157 | chr2:178537573;178537572;178537571 | chr2:179402300;179402299;179402298 |
N2B | 24147 | 72664;72665;72666 | chr2:178537573;178537572;178537571 | chr2:179402300;179402299;179402298 |
Novex-1 | 24272 | 73039;73040;73041 | chr2:178537573;178537572;178537571 | chr2:179402300;179402299;179402298 |
Novex-2 | 24339 | 73240;73241;73242 | chr2:178537573;178537572;178537571 | chr2:179402300;179402299;179402298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.997 | N | 0.365 | 0.333 | 0.354396617058 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
S/P | rs1692192706 | None | 0.969 | N | 0.369 | 0.291 | 0.218845423259 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/P | rs1692192706 | None | 0.969 | N | 0.369 | 0.291 | 0.218845423259 | gnomAD-4.0.0 | 6.57065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46998E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1312 | likely_benign | 0.1354 | benign | -0.656 | Destabilizing | 0.028 | N | 0.367 | neutral | N | 0.45590183 | None | None | N |
S/C | 0.1866 | likely_benign | 0.2042 | benign | -0.418 | Destabilizing | 0.997 | D | 0.365 | neutral | N | 0.500308755 | None | None | N |
S/D | 0.5102 | ambiguous | 0.5212 | ambiguous | -0.143 | Destabilizing | 0.852 | D | 0.347 | neutral | None | None | None | None | N |
S/E | 0.6398 | likely_pathogenic | 0.6141 | pathogenic | -0.215 | Destabilizing | 0.889 | D | 0.346 | neutral | None | None | None | None | N |
S/F | 0.478 | ambiguous | 0.5144 | ambiguous | -1.16 | Destabilizing | 0.991 | D | 0.458 | neutral | N | 0.500308755 | None | None | N |
S/G | 0.0902 | likely_benign | 0.1122 | benign | -0.805 | Destabilizing | 0.014 | N | 0.185 | neutral | None | None | None | None | N |
S/H | 0.5097 | ambiguous | 0.4991 | ambiguous | -1.346 | Destabilizing | 0.999 | D | 0.363 | neutral | None | None | None | None | N |
S/I | 0.4479 | ambiguous | 0.5093 | ambiguous | -0.384 | Destabilizing | 0.987 | D | 0.461 | neutral | None | None | None | None | N |
S/K | 0.7854 | likely_pathogenic | 0.7689 | pathogenic | -0.606 | Destabilizing | 0.955 | D | 0.345 | neutral | None | None | None | None | N |
S/L | 0.2458 | likely_benign | 0.2849 | benign | -0.384 | Destabilizing | 0.915 | D | 0.431 | neutral | None | None | None | None | N |
S/M | 0.3191 | likely_benign | 0.3517 | ambiguous | 0.051 | Stabilizing | 0.999 | D | 0.361 | neutral | None | None | None | None | N |
S/N | 0.1608 | likely_benign | 0.1674 | benign | -0.412 | Destabilizing | 0.402 | N | 0.401 | neutral | None | None | None | None | N |
S/P | 0.9426 | likely_pathogenic | 0.9633 | pathogenic | -0.446 | Destabilizing | 0.969 | D | 0.369 | neutral | N | 0.499962038 | None | None | N |
S/Q | 0.5885 | likely_pathogenic | 0.5767 | pathogenic | -0.714 | Destabilizing | 0.993 | D | 0.384 | neutral | None | None | None | None | N |
S/R | 0.7336 | likely_pathogenic | 0.7257 | pathogenic | -0.375 | Destabilizing | 0.993 | D | 0.371 | neutral | None | None | None | None | N |
S/T | 0.1114 | likely_benign | 0.1262 | benign | -0.518 | Destabilizing | 0.001 | N | 0.158 | neutral | N | 0.402395419 | None | None | N |
S/V | 0.3997 | ambiguous | 0.4424 | ambiguous | -0.446 | Destabilizing | 0.801 | D | 0.421 | neutral | None | None | None | None | N |
S/W | 0.6606 | likely_pathogenic | 0.6922 | pathogenic | -1.094 | Destabilizing | 0.999 | D | 0.523 | neutral | None | None | None | None | N |
S/Y | 0.3953 | ambiguous | 0.4037 | ambiguous | -0.84 | Destabilizing | 0.997 | D | 0.455 | neutral | N | 0.481280277 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.