Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33220 | 99883;99884;99885 | chr2:178537549;178537548;178537547 | chr2:179402276;179402275;179402274 |
N2AB | 31579 | 94960;94961;94962 | chr2:178537549;178537548;178537547 | chr2:179402276;179402275;179402274 |
N2A | 30652 | 92179;92180;92181 | chr2:178537549;178537548;178537547 | chr2:179402276;179402275;179402274 |
N2B | 24155 | 72688;72689;72690 | chr2:178537549;178537548;178537547 | chr2:179402276;179402275;179402274 |
Novex-1 | 24280 | 73063;73064;73065 | chr2:178537549;178537548;178537547 | chr2:179402276;179402275;179402274 |
Novex-2 | 24347 | 73264;73265;73266 | chr2:178537549;178537548;178537547 | chr2:179402276;179402275;179402274 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | N | 0.697 | 0.558 | 0.61844985043 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
Y/H | rs776277442 | -3.152 | 1.0 | N | 0.747 | 0.55 | 0.504175077286 | gnomAD-4.0.0 | 1.11401E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.94175E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9692 | likely_pathogenic | 0.9714 | pathogenic | -3.029 | Highly Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
Y/C | 0.6484 | likely_pathogenic | 0.7136 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.485857367 | None | None | N |
Y/D | 0.9927 | likely_pathogenic | 0.9934 | pathogenic | -2.842 | Highly Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.485857367 | None | None | N |
Y/E | 0.9975 | likely_pathogenic | 0.9977 | pathogenic | -2.695 | Highly Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
Y/F | 0.18 | likely_benign | 0.2075 | benign | -1.182 | Destabilizing | 1.0 | D | 0.511 | neutral | N | 0.472893733 | None | None | N |
Y/G | 0.9579 | likely_pathogenic | 0.9578 | pathogenic | -3.394 | Highly Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
Y/H | 0.8997 | likely_pathogenic | 0.898 | pathogenic | -1.829 | Destabilizing | 1.0 | D | 0.747 | deleterious | N | 0.485857367 | None | None | N |
Y/I | 0.925 | likely_pathogenic | 0.9439 | pathogenic | -1.841 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Y/K | 0.9955 | likely_pathogenic | 0.9949 | pathogenic | -2.049 | Highly Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
Y/L | 0.8757 | likely_pathogenic | 0.9162 | pathogenic | -1.841 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
Y/M | 0.9568 | likely_pathogenic | 0.9642 | pathogenic | -1.368 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/N | 0.9408 | likely_pathogenic | 0.9428 | pathogenic | -2.596 | Highly Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.485857367 | None | None | N |
Y/P | 0.9953 | likely_pathogenic | 0.9955 | pathogenic | -2.246 | Highly Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
Y/Q | 0.9929 | likely_pathogenic | 0.9933 | pathogenic | -2.468 | Highly Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
Y/R | 0.9844 | likely_pathogenic | 0.9838 | pathogenic | -1.601 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/S | 0.9379 | likely_pathogenic | 0.94 | pathogenic | -2.971 | Highly Destabilizing | 1.0 | D | 0.705 | prob.neutral | D | 0.523610555 | None | None | N |
Y/T | 0.9755 | likely_pathogenic | 0.9762 | pathogenic | -2.727 | Highly Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
Y/V | 0.8156 | likely_pathogenic | 0.855 | pathogenic | -2.246 | Highly Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
Y/W | 0.8073 | likely_pathogenic | 0.8122 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.