Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33225 | 99898;99899;99900 | chr2:178537534;178537533;178537532 | chr2:179402261;179402260;179402259 |
N2AB | 31584 | 94975;94976;94977 | chr2:178537534;178537533;178537532 | chr2:179402261;179402260;179402259 |
N2A | 30657 | 92194;92195;92196 | chr2:178537534;178537533;178537532 | chr2:179402261;179402260;179402259 |
N2B | 24160 | 72703;72704;72705 | chr2:178537534;178537533;178537532 | chr2:179402261;179402260;179402259 |
Novex-1 | 24285 | 73078;73079;73080 | chr2:178537534;178537533;178537532 | chr2:179402261;179402260;179402259 |
Novex-2 | 24352 | 73279;73280;73281 | chr2:178537534;178537533;178537532 | chr2:179402261;179402260;179402259 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.175 | 0.097 | 0.363356657567 | gnomAD-4.0.0 | 1.36851E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31884E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2155 | likely_benign | 0.2207 | benign | -1.368 | Destabilizing | 0.239 | N | 0.344 | neutral | N | 0.421176833 | None | None | N |
V/C | 0.8534 | likely_pathogenic | 0.8681 | pathogenic | -0.724 | Destabilizing | 0.988 | D | 0.454 | neutral | None | None | None | None | N |
V/D | 0.4811 | ambiguous | 0.524 | ambiguous | -1.244 | Destabilizing | 0.946 | D | 0.615 | neutral | None | None | None | None | N |
V/E | 0.3237 | likely_benign | 0.3289 | benign | -1.271 | Destabilizing | 0.868 | D | 0.581 | neutral | N | 0.406418025 | None | None | N |
V/F | 0.2597 | likely_benign | 0.2785 | benign | -1.141 | Destabilizing | 0.868 | D | 0.428 | neutral | None | None | None | None | N |
V/G | 0.4361 | ambiguous | 0.4573 | ambiguous | -1.65 | Destabilizing | 0.947 | D | 0.596 | neutral | N | 0.486863108 | None | None | N |
V/H | 0.6819 | likely_pathogenic | 0.6982 | pathogenic | -1.238 | Destabilizing | 0.991 | D | 0.631 | neutral | None | None | None | None | N |
V/I | 0.0814 | likely_benign | 0.0887 | benign | -0.703 | Destabilizing | None | N | 0.175 | neutral | N | 0.425257288 | None | None | N |
V/K | 0.3843 | ambiguous | 0.3628 | ambiguous | -1.202 | Destabilizing | 0.861 | D | 0.569 | neutral | None | None | None | None | N |
V/L | 0.1992 | likely_benign | 0.2089 | benign | -0.703 | Destabilizing | 0.004 | N | 0.234 | neutral | N | 0.443149616 | None | None | N |
V/M | 0.1499 | likely_benign | 0.1633 | benign | -0.463 | Destabilizing | 0.107 | N | 0.291 | neutral | None | None | None | None | N |
V/N | 0.3527 | ambiguous | 0.3771 | ambiguous | -0.879 | Destabilizing | 0.738 | D | 0.627 | neutral | None | None | None | None | N |
V/P | 0.5351 | ambiguous | 0.5012 | ambiguous | -0.89 | Destabilizing | 0.738 | D | 0.595 | neutral | None | None | None | None | N |
V/Q | 0.3538 | ambiguous | 0.3424 | ambiguous | -1.08 | Destabilizing | 0.815 | D | 0.603 | neutral | None | None | None | None | N |
V/R | 0.3877 | ambiguous | 0.3672 | ambiguous | -0.637 | Destabilizing | 0.93 | D | 0.623 | neutral | None | None | None | None | N |
V/S | 0.2699 | likely_benign | 0.2753 | benign | -1.315 | Destabilizing | 0.878 | D | 0.529 | neutral | None | None | None | None | N |
V/T | 0.2387 | likely_benign | 0.2513 | benign | -1.243 | Destabilizing | 0.289 | N | 0.357 | neutral | None | None | None | None | N |
V/W | 0.9237 | likely_pathogenic | 0.9328 | pathogenic | -1.323 | Destabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
V/Y | 0.7079 | likely_pathogenic | 0.7166 | pathogenic | -1.051 | Destabilizing | 0.93 | D | 0.423 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.