Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3323 | 10192;10193;10194 | chr2:178764548;178764547;178764546 | chr2:179629275;179629274;179629273 |
N2AB | 3323 | 10192;10193;10194 | chr2:178764548;178764547;178764546 | chr2:179629275;179629274;179629273 |
N2A | 3323 | 10192;10193;10194 | chr2:178764548;178764547;178764546 | chr2:179629275;179629274;179629273 |
N2B | 3277 | 10054;10055;10056 | chr2:178764548;178764547;178764546 | chr2:179629275;179629274;179629273 |
Novex-1 | 3277 | 10054;10055;10056 | chr2:178764548;178764547;178764546 | chr2:179629275;179629274;179629273 |
Novex-2 | 3277 | 10054;10055;10056 | chr2:178764548;178764547;178764546 | chr2:179629275;179629274;179629273 |
Novex-3 | 3323 | 10192;10193;10194 | chr2:178764548;178764547;178764546 | chr2:179629275;179629274;179629273 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | rs2090015166 | None | 0.116 | N | 0.205 | 0.249 | 0.239305524855 | gnomAD-4.0.0 | 1.36816E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79859E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1029 | likely_benign | 0.1042 | benign | -0.565 | Destabilizing | 0.116 | N | 0.205 | neutral | N | 0.512976332 | None | None | N |
S/C | 0.2743 | likely_benign | 0.2555 | benign | -0.347 | Destabilizing | 1.0 | D | 0.572 | neutral | None | None | None | None | N |
S/D | 0.7479 | likely_pathogenic | 0.6717 | pathogenic | 0.122 | Stabilizing | 0.984 | D | 0.527 | neutral | None | None | None | None | N |
S/E | 0.665 | likely_pathogenic | 0.6148 | pathogenic | 0.046 | Stabilizing | 0.984 | D | 0.49 | neutral | None | None | None | None | N |
S/F | 0.3801 | ambiguous | 0.3228 | benign | -1.048 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
S/G | 0.2325 | likely_benign | 0.2067 | benign | -0.711 | Destabilizing | 0.927 | D | 0.504 | neutral | None | None | None | None | N |
S/H | 0.5339 | ambiguous | 0.4839 | ambiguous | -1.243 | Destabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | N |
S/I | 0.3916 | ambiguous | 0.3599 | ambiguous | -0.302 | Destabilizing | 0.991 | D | 0.667 | neutral | None | None | None | None | N |
S/K | 0.7751 | likely_pathogenic | 0.6995 | pathogenic | -0.518 | Destabilizing | 0.984 | D | 0.487 | neutral | None | None | None | None | N |
S/L | 0.2247 | likely_benign | 0.1981 | benign | -0.302 | Destabilizing | 0.959 | D | 0.588 | neutral | D | 0.565018994 | None | None | N |
S/M | 0.3698 | ambiguous | 0.3157 | benign | 0.034 | Stabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
S/N | 0.3745 | ambiguous | 0.3279 | benign | -0.258 | Destabilizing | 0.984 | D | 0.542 | neutral | None | None | None | None | N |
S/P | 0.8957 | likely_pathogenic | 0.8429 | pathogenic | -0.36 | Destabilizing | 0.994 | D | 0.601 | neutral | D | 0.638389577 | None | None | N |
S/Q | 0.6117 | likely_pathogenic | 0.5597 | ambiguous | -0.534 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
S/R | 0.636 | likely_pathogenic | 0.5809 | pathogenic | -0.33 | Destabilizing | 0.995 | D | 0.601 | neutral | None | None | None | None | N |
S/T | 0.1053 | likely_benign | 0.0895 | benign | -0.388 | Destabilizing | 0.116 | N | 0.219 | neutral | N | 0.494789785 | None | None | N |
S/V | 0.3127 | likely_benign | 0.2817 | benign | -0.36 | Destabilizing | 0.969 | D | 0.601 | neutral | None | None | None | None | N |
S/W | 0.6173 | likely_pathogenic | 0.5538 | ambiguous | -0.993 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
S/Y | 0.3523 | ambiguous | 0.317 | benign | -0.734 | Destabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.