Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33241 | 99946;99947;99948 | chr2:178537486;178537485;178537484 | chr2:179402213;179402212;179402211 |
N2AB | 31600 | 95023;95024;95025 | chr2:178537486;178537485;178537484 | chr2:179402213;179402212;179402211 |
N2A | 30673 | 92242;92243;92244 | chr2:178537486;178537485;178537484 | chr2:179402213;179402212;179402211 |
N2B | 24176 | 72751;72752;72753 | chr2:178537486;178537485;178537484 | chr2:179402213;179402212;179402211 |
Novex-1 | 24301 | 73126;73127;73128 | chr2:178537486;178537485;178537484 | chr2:179402213;179402212;179402211 |
Novex-2 | 24368 | 73327;73328;73329 | chr2:178537486;178537485;178537484 | chr2:179402213;179402212;179402211 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1318192796 | 0.75 | 0.996 | N | 0.579 | 0.395 | 0.293147016451 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs1318192796 | 0.75 | 0.996 | N | 0.579 | 0.395 | 0.293147016451 | gnomAD-4.0.0 | 3.18324E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86623E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1901 | likely_benign | 0.1811 | benign | -0.01 | Destabilizing | 0.992 | D | 0.564 | neutral | N | 0.50817609 | None | None | N |
E/C | 0.9102 | likely_pathogenic | 0.9059 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/D | 0.1104 | likely_benign | 0.1022 | benign | -0.34 | Destabilizing | 0.941 | D | 0.455 | neutral | N | 0.467732189 | None | None | N |
E/F | 0.866 | likely_pathogenic | 0.8932 | pathogenic | -0.102 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/G | 0.1554 | likely_benign | 0.153 | benign | -0.099 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.495225435 | None | None | N |
E/H | 0.5731 | likely_pathogenic | 0.5567 | ambiguous | 0.481 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/I | 0.5535 | ambiguous | 0.565 | pathogenic | 0.165 | Stabilizing | 0.998 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/K | 0.1459 | likely_benign | 0.1397 | benign | 0.401 | Stabilizing | 0.996 | D | 0.579 | neutral | N | 0.501807478 | None | None | N |
E/L | 0.5915 | likely_pathogenic | 0.5948 | pathogenic | 0.165 | Stabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
E/M | 0.6611 | likely_pathogenic | 0.6662 | pathogenic | -0.006 | Destabilizing | 0.997 | D | 0.657 | neutral | None | None | None | None | N |
E/N | 0.2748 | likely_benign | 0.2582 | benign | 0.208 | Stabilizing | 0.996 | D | 0.675 | neutral | None | None | None | None | N |
E/P | 0.3694 | ambiguous | 0.3573 | ambiguous | 0.123 | Stabilizing | 0.987 | D | 0.623 | neutral | None | None | None | None | N |
E/Q | 0.1987 | likely_benign | 0.1856 | benign | 0.209 | Stabilizing | 0.998 | D | 0.573 | neutral | N | 0.508696164 | None | None | N |
E/R | 0.2795 | likely_benign | 0.2761 | benign | 0.57 | Stabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
E/S | 0.2184 | likely_benign | 0.2096 | benign | 0.073 | Stabilizing | 0.994 | D | 0.577 | neutral | None | None | None | None | N |
E/T | 0.2945 | likely_benign | 0.2928 | benign | 0.158 | Stabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
E/V | 0.3583 | ambiguous | 0.3671 | ambiguous | 0.123 | Stabilizing | 0.996 | D | 0.617 | neutral | N | 0.471785361 | None | None | N |
E/W | 0.9314 | likely_pathogenic | 0.9381 | pathogenic | -0.082 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/Y | 0.7646 | likely_pathogenic | 0.782 | pathogenic | 0.109 | Stabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.