Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33248 | 99967;99968;99969 | chr2:178537465;178537464;178537463 | chr2:179402192;179402191;179402190 |
N2AB | 31607 | 95044;95045;95046 | chr2:178537465;178537464;178537463 | chr2:179402192;179402191;179402190 |
N2A | 30680 | 92263;92264;92265 | chr2:178537465;178537464;178537463 | chr2:179402192;179402191;179402190 |
N2B | 24183 | 72772;72773;72774 | chr2:178537465;178537464;178537463 | chr2:179402192;179402191;179402190 |
Novex-1 | 24308 | 73147;73148;73149 | chr2:178537465;178537464;178537463 | chr2:179402192;179402191;179402190 |
Novex-2 | 24375 | 73348;73349;73350 | chr2:178537465;178537464;178537463 | chr2:179402192;179402191;179402190 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs1455373620 | None | 0.996 | N | 0.46 | 0.335 | 0.421060224861 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/S | rs1455373620 | None | 0.996 | N | 0.46 | 0.335 | 0.421060224861 | gnomAD-4.0.0 | 6.57246E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46994E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.4455 | ambiguous | 0.4666 | ambiguous | -0.916 | Destabilizing | 0.996 | D | 0.461 | neutral | D | 0.529576522 | None | None | N |
T/C | 0.8884 | likely_pathogenic | 0.9106 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
T/D | 0.8121 | likely_pathogenic | 0.7949 | pathogenic | -0.89 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/E | 0.8745 | likely_pathogenic | 0.864 | pathogenic | -0.769 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/F | 0.9015 | likely_pathogenic | 0.918 | pathogenic | -0.613 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
T/G | 0.6929 | likely_pathogenic | 0.6682 | pathogenic | -1.287 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
T/H | 0.7862 | likely_pathogenic | 0.7745 | pathogenic | -1.49 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
T/I | 0.8751 | likely_pathogenic | 0.893 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.671 | neutral | N | 0.491443682 | None | None | N |
T/K | 0.7393 | likely_pathogenic | 0.711 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/L | 0.5647 | likely_pathogenic | 0.6121 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | N |
T/M | 0.4329 | ambiguous | 0.4666 | ambiguous | 0.189 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
T/N | 0.4168 | ambiguous | 0.4016 | ambiguous | -1.143 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.518108734 | None | None | N |
T/P | 0.8131 | likely_pathogenic | 0.8114 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.675 | neutral | D | 0.530443313 | None | None | N |
T/Q | 0.7562 | likely_pathogenic | 0.7474 | pathogenic | -1.007 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/R | 0.6818 | likely_pathogenic | 0.6614 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/S | 0.3288 | likely_benign | 0.3339 | benign | -1.344 | Destabilizing | 0.996 | D | 0.46 | neutral | N | 0.513625634 | None | None | N |
T/V | 0.7344 | likely_pathogenic | 0.7638 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.527 | neutral | None | None | None | None | N |
T/W | 0.969 | likely_pathogenic | 0.9693 | pathogenic | -0.768 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
T/Y | 0.9087 | likely_pathogenic | 0.9173 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.