Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33249 | 99970;99971;99972 | chr2:178537462;178537461;178537460 | chr2:179402189;179402188;179402187 |
N2AB | 31608 | 95047;95048;95049 | chr2:178537462;178537461;178537460 | chr2:179402189;179402188;179402187 |
N2A | 30681 | 92266;92267;92268 | chr2:178537462;178537461;178537460 | chr2:179402189;179402188;179402187 |
N2B | 24184 | 72775;72776;72777 | chr2:178537462;178537461;178537460 | chr2:179402189;179402188;179402187 |
Novex-1 | 24309 | 73150;73151;73152 | chr2:178537462;178537461;178537460 | chr2:179402189;179402188;179402187 |
Novex-2 | 24376 | 73351;73352;73353 | chr2:178537462;178537461;178537460 | chr2:179402189;179402188;179402187 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.557 | 0.38 | 0.223847106136 | gnomAD-4.0.0 | 1.36878E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.04541E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3538 | ambiguous | 0.3614 | ambiguous | -0.516 | Destabilizing | 0.998 | D | 0.627 | neutral | N | 0.475679669 | None | None | N |
E/C | 0.9774 | likely_pathogenic | 0.9748 | pathogenic | -0.347 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
E/D | 0.2649 | likely_benign | 0.2587 | benign | -0.427 | Destabilizing | 0.074 | N | 0.289 | neutral | N | 0.430040593 | None | None | N |
E/F | 0.9649 | likely_pathogenic | 0.9629 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/G | 0.3849 | ambiguous | 0.3995 | ambiguous | -0.749 | Destabilizing | 1.0 | D | 0.591 | neutral | N | 0.464438381 | None | None | N |
E/H | 0.8632 | likely_pathogenic | 0.8572 | pathogenic | 0.064 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
E/I | 0.7663 | likely_pathogenic | 0.7827 | pathogenic | 0.08 | Stabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/K | 0.3739 | ambiguous | 0.391 | ambiguous | -0.122 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.475506311 | None | None | N |
E/L | 0.8027 | likely_pathogenic | 0.8044 | pathogenic | 0.08 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
E/M | 0.8427 | likely_pathogenic | 0.8448 | pathogenic | 0.09 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
E/N | 0.6202 | likely_pathogenic | 0.6173 | pathogenic | -0.397 | Destabilizing | 0.997 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/P | 0.6425 | likely_pathogenic | 0.6023 | pathogenic | -0.099 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/Q | 0.3656 | ambiguous | 0.3739 | ambiguous | -0.334 | Destabilizing | 0.999 | D | 0.638 | neutral | N | 0.491110481 | None | None | N |
E/R | 0.5712 | likely_pathogenic | 0.5668 | pathogenic | 0.263 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/S | 0.4372 | ambiguous | 0.435 | ambiguous | -0.624 | Destabilizing | 0.996 | D | 0.591 | neutral | None | None | None | None | N |
E/T | 0.5668 | likely_pathogenic | 0.5835 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
E/V | 0.5868 | likely_pathogenic | 0.6103 | pathogenic | -0.099 | Destabilizing | 1.0 | D | 0.655 | neutral | N | 0.510389675 | None | None | N |
E/W | 0.9864 | likely_pathogenic | 0.9848 | pathogenic | -0.029 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
E/Y | 0.9311 | likely_pathogenic | 0.9272 | pathogenic | 0.016 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.