Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33250 | 99973;99974;99975 | chr2:178537459;178537458;178537457 | chr2:179402186;179402185;179402184 |
N2AB | 31609 | 95050;95051;95052 | chr2:178537459;178537458;178537457 | chr2:179402186;179402185;179402184 |
N2A | 30682 | 92269;92270;92271 | chr2:178537459;178537458;178537457 | chr2:179402186;179402185;179402184 |
N2B | 24185 | 72778;72779;72780 | chr2:178537459;178537458;178537457 | chr2:179402186;179402185;179402184 |
Novex-1 | 24310 | 73153;73154;73155 | chr2:178537459;178537458;178537457 | chr2:179402186;179402185;179402184 |
Novex-2 | 24377 | 73354;73355;73356 | chr2:178537459;178537458;178537457 | chr2:179402186;179402185;179402184 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs1395830573 | -1.039 | 0.465 | N | 0.319 | 0.178 | 0.225215365344 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.6E-05 | None | 0 | None | 0 | 0 | 0 |
H/R | rs1395830573 | -1.039 | 0.465 | N | 0.319 | 0.178 | 0.225215365344 | gnomAD-4.0.0 | 3.18457E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77701E-05 | None | 0 | 0 | 0 | 1.4339E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4684 | ambiguous | 0.5322 | ambiguous | -0.484 | Destabilizing | 0.343 | N | 0.493 | neutral | None | None | None | None | N |
H/C | 0.3653 | ambiguous | 0.3998 | ambiguous | 0.297 | Stabilizing | 0.993 | D | 0.518 | neutral | None | None | None | None | N |
H/D | 0.3383 | likely_benign | 0.384 | ambiguous | -0.668 | Destabilizing | 0.351 | N | 0.423 | neutral | N | 0.436124856 | None | None | N |
H/E | 0.5214 | ambiguous | 0.5477 | ambiguous | -0.57 | Destabilizing | 0.331 | N | 0.351 | neutral | None | None | None | None | N |
H/F | 0.4072 | ambiguous | 0.4535 | ambiguous | 0.826 | Stabilizing | 0.986 | D | 0.453 | neutral | None | None | None | None | N |
H/G | 0.4745 | ambiguous | 0.5386 | ambiguous | -0.837 | Destabilizing | 0.705 | D | 0.521 | neutral | None | None | None | None | N |
H/I | 0.5684 | likely_pathogenic | 0.6232 | pathogenic | 0.488 | Stabilizing | 0.942 | D | 0.519 | neutral | None | None | None | None | N |
H/K | 0.4504 | ambiguous | 0.4488 | ambiguous | -0.215 | Destabilizing | 0.322 | N | 0.433 | neutral | None | None | None | None | N |
H/L | 0.248 | likely_benign | 0.2651 | benign | 0.488 | Stabilizing | 0.634 | D | 0.514 | neutral | N | 0.486343033 | None | None | N |
H/M | 0.6237 | likely_pathogenic | 0.6481 | pathogenic | 0.248 | Stabilizing | 0.942 | D | 0.517 | neutral | None | None | None | None | N |
H/N | 0.0758 | likely_benign | 0.1132 | benign | -0.524 | Destabilizing | 0.351 | N | 0.333 | neutral | N | 0.415384224 | None | None | N |
H/P | 0.7028 | likely_pathogenic | 0.6996 | pathogenic | 0.184 | Stabilizing | 0.726 | D | 0.513 | neutral | N | 0.456886917 | None | None | N |
H/Q | 0.2917 | likely_benign | 0.3458 | ambiguous | -0.317 | Destabilizing | 0.024 | N | 0.242 | neutral | N | 0.447862002 | None | None | N |
H/R | 0.2281 | likely_benign | 0.248 | benign | -0.722 | Destabilizing | 0.465 | N | 0.319 | neutral | N | 0.456020126 | None | None | N |
H/S | 0.2947 | likely_benign | 0.3751 | ambiguous | -0.424 | Destabilizing | 0.031 | N | 0.255 | neutral | None | None | None | None | N |
H/T | 0.3557 | ambiguous | 0.4372 | ambiguous | -0.217 | Destabilizing | 0.264 | N | 0.503 | neutral | None | None | None | None | N |
H/V | 0.5065 | ambiguous | 0.5489 | ambiguous | 0.184 | Stabilizing | 0.706 | D | 0.529 | neutral | None | None | None | None | N |
H/W | 0.6205 | likely_pathogenic | 0.6064 | pathogenic | 1.116 | Stabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
H/Y | 0.1174 | likely_benign | 0.1378 | benign | 1.129 | Stabilizing | 0.831 | D | 0.388 | neutral | N | 0.408498325 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.