Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33252 | 99979;99980;99981 | chr2:178537453;178537452;178537451 | chr2:179402180;179402179;179402178 |
N2AB | 31611 | 95056;95057;95058 | chr2:178537453;178537452;178537451 | chr2:179402180;179402179;179402178 |
N2A | 30684 | 92275;92276;92277 | chr2:178537453;178537452;178537451 | chr2:179402180;179402179;179402178 |
N2B | 24187 | 72784;72785;72786 | chr2:178537453;178537452;178537451 | chr2:179402180;179402179;179402178 |
Novex-1 | 24312 | 73159;73160;73161 | chr2:178537453;178537452;178537451 | chr2:179402180;179402179;179402178 |
Novex-2 | 24379 | 73360;73361;73362 | chr2:178537453;178537452;178537451 | chr2:179402180;179402179;179402178 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 1.0 | N | 0.813 | 0.428 | 0.284539287134 | gnomAD-4.0.0 | 1.36887E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16036E-05 | 1.65706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.3913 | ambiguous | 0.3565 | ambiguous | -1.968 | Destabilizing | 0.997 | D | 0.662 | neutral | N | 0.485605874 | None | None | N |
T/C | 0.7573 | likely_pathogenic | 0.7616 | pathogenic | -1.667 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
T/D | 0.9898 | likely_pathogenic | 0.9829 | pathogenic | -1.927 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
T/E | 0.9909 | likely_pathogenic | 0.9858 | pathogenic | -1.675 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
T/F | 0.9694 | likely_pathogenic | 0.9632 | pathogenic | -1.025 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
T/G | 0.8147 | likely_pathogenic | 0.7575 | pathogenic | -2.29 | Highly Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/H | 0.9589 | likely_pathogenic | 0.9434 | pathogenic | -1.8 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
T/I | 0.8756 | likely_pathogenic | 0.8412 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.813 | deleterious | N | 0.511600397 | None | None | N |
T/K | 0.9859 | likely_pathogenic | 0.9792 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
T/L | 0.6674 | likely_pathogenic | 0.638 | pathogenic | -1.048 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
T/M | 0.5576 | ambiguous | 0.5307 | ambiguous | -1.516 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
T/N | 0.8525 | likely_pathogenic | 0.8065 | pathogenic | -1.713 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.461719275 | None | None | N |
T/P | 0.9671 | likely_pathogenic | 0.9619 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.808 | deleterious | N | 0.45488242 | None | None | N |
T/Q | 0.9573 | likely_pathogenic | 0.9426 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
T/R | 0.9749 | likely_pathogenic | 0.9656 | pathogenic | -1.452 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
T/S | 0.3042 | likely_benign | 0.2976 | benign | -2.095 | Highly Destabilizing | 0.929 | D | 0.531 | neutral | N | 0.469193627 | None | None | N |
T/V | 0.707 | likely_pathogenic | 0.6763 | pathogenic | -1.342 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
T/W | 0.9947 | likely_pathogenic | 0.9937 | pathogenic | -1.207 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
T/Y | 0.9798 | likely_pathogenic | 0.9737 | pathogenic | -1.096 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.