Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33258 | 99997;99998;99999 | chr2:178537435;178537434;178537433 | chr2:179402162;179402161;179402160 |
N2AB | 31617 | 95074;95075;95076 | chr2:178537435;178537434;178537433 | chr2:179402162;179402161;179402160 |
N2A | 30690 | 92293;92294;92295 | chr2:178537435;178537434;178537433 | chr2:179402162;179402161;179402160 |
N2B | 24193 | 72802;72803;72804 | chr2:178537435;178537434;178537433 | chr2:179402162;179402161;179402160 |
Novex-1 | 24318 | 73177;73178;73179 | chr2:178537435;178537434;178537433 | chr2:179402162;179402161;179402160 |
Novex-2 | 24385 | 73378;73379;73380 | chr2:178537435;178537434;178537433 | chr2:179402162;179402161;179402160 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.999 | N | 0.609 | 0.369 | 0.270889551736 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5 | ambiguous | 0.5317 | ambiguous | -0.479 | Destabilizing | 0.619 | D | 0.545 | neutral | None | None | None | None | N |
N/C | 0.6539 | likely_pathogenic | 0.7258 | pathogenic | 0.416 | Stabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
N/D | 0.1619 | likely_benign | 0.1678 | benign | -0.344 | Destabilizing | 0.939 | D | 0.495 | neutral | N | 0.485261944 | None | None | N |
N/E | 0.5287 | ambiguous | 0.5466 | ambiguous | -0.34 | Destabilizing | 0.996 | D | 0.552 | neutral | None | None | None | None | N |
N/F | 0.7915 | likely_pathogenic | 0.8286 | pathogenic | -0.63 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
N/G | 0.4682 | ambiguous | 0.4878 | ambiguous | -0.723 | Destabilizing | 0.208 | N | 0.258 | neutral | None | None | None | None | N |
N/H | 0.2083 | likely_benign | 0.2237 | benign | -0.755 | Destabilizing | 0.999 | D | 0.609 | neutral | N | 0.479840438 | None | None | N |
N/I | 0.6279 | likely_pathogenic | 0.6948 | pathogenic | 0.097 | Stabilizing | 0.999 | D | 0.742 | deleterious | N | 0.480854396 | None | None | N |
N/K | 0.465 | ambiguous | 0.4845 | ambiguous | -0.067 | Destabilizing | 0.999 | D | 0.569 | neutral | N | 0.485955378 | None | None | N |
N/L | 0.5872 | likely_pathogenic | 0.6385 | pathogenic | 0.097 | Stabilizing | 0.997 | D | 0.718 | prob.delet. | None | None | None | None | N |
N/M | 0.5848 | likely_pathogenic | 0.6342 | pathogenic | 0.684 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
N/P | 0.953 | likely_pathogenic | 0.9651 | pathogenic | -0.066 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | None | None | None | None | N |
N/Q | 0.5074 | ambiguous | 0.5175 | ambiguous | -0.582 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
N/R | 0.5829 | likely_pathogenic | 0.6076 | pathogenic | 0.002 | Stabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
N/S | 0.1997 | likely_benign | 0.212 | benign | -0.351 | Destabilizing | 0.884 | D | 0.419 | neutral | N | 0.50679201 | None | None | N |
N/T | 0.3196 | likely_benign | 0.3569 | ambiguous | -0.192 | Destabilizing | 0.96 | D | 0.557 | neutral | N | 0.479840438 | None | None | N |
N/V | 0.615 | likely_pathogenic | 0.6723 | pathogenic | -0.066 | Destabilizing | 0.965 | D | 0.725 | prob.delet. | None | None | None | None | N |
N/W | 0.9238 | likely_pathogenic | 0.9369 | pathogenic | -0.527 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
N/Y | 0.2701 | likely_benign | 0.3133 | benign | -0.294 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.462243162 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.