Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3326 | 10201;10202;10203 | chr2:178764539;178764538;178764537 | chr2:179629266;179629265;179629264 |
N2AB | 3326 | 10201;10202;10203 | chr2:178764539;178764538;178764537 | chr2:179629266;179629265;179629264 |
N2A | 3326 | 10201;10202;10203 | chr2:178764539;178764538;178764537 | chr2:179629266;179629265;179629264 |
N2B | 3280 | 10063;10064;10065 | chr2:178764539;178764538;178764537 | chr2:179629266;179629265;179629264 |
Novex-1 | 3280 | 10063;10064;10065 | chr2:178764539;178764538;178764537 | chr2:179629266;179629265;179629264 |
Novex-2 | 3280 | 10063;10064;10065 | chr2:178764539;178764538;178764537 | chr2:179629266;179629265;179629264 |
Novex-3 | 3326 | 10201;10202;10203 | chr2:178764539;178764538;178764537 | chr2:179629266;179629265;179629264 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.809 | 0.69 | 0.819994532182 | gnomAD-4.0.0 | 1.59064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.966 | likely_pathogenic | 0.9617 | pathogenic | -2.744 | Highly Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
L/C | 0.96 | likely_pathogenic | 0.9551 | pathogenic | -2.234 | Highly Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/D | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -3.069 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
L/E | 0.9974 | likely_pathogenic | 0.9973 | pathogenic | -2.812 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/F | 0.7703 | likely_pathogenic | 0.7821 | pathogenic | -1.727 | Destabilizing | 1.0 | D | 0.809 | deleterious | D | 0.709383927 | None | None | N |
L/G | 0.9953 | likely_pathogenic | 0.9944 | pathogenic | -3.327 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/H | 0.9941 | likely_pathogenic | 0.9935 | pathogenic | -2.787 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.7988856 | None | None | N |
L/I | 0.3 | likely_benign | 0.3112 | benign | -1.036 | Destabilizing | 0.999 | D | 0.579 | neutral | D | 0.607141204 | None | None | N |
L/K | 0.9953 | likely_pathogenic | 0.9953 | pathogenic | -2.055 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/M | 0.5353 | ambiguous | 0.5418 | ambiguous | -1.135 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
L/N | 0.9976 | likely_pathogenic | 0.9975 | pathogenic | -2.514 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
L/P | 0.9976 | likely_pathogenic | 0.9975 | pathogenic | -1.588 | Destabilizing | 1.0 | D | 0.865 | deleterious | D | 0.7988856 | None | None | N |
L/Q | 0.989 | likely_pathogenic | 0.9875 | pathogenic | -2.326 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/R | 0.9866 | likely_pathogenic | 0.9854 | pathogenic | -1.836 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.7988856 | None | None | N |
L/S | 0.9954 | likely_pathogenic | 0.9949 | pathogenic | -3.254 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
L/T | 0.982 | likely_pathogenic | 0.9806 | pathogenic | -2.835 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/V | 0.3477 | ambiguous | 0.347 | ambiguous | -1.588 | Destabilizing | 0.999 | D | 0.579 | neutral | D | 0.606195124 | None | None | N |
L/W | 0.9869 | likely_pathogenic | 0.9865 | pathogenic | -2.098 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
L/Y | 0.9881 | likely_pathogenic | 0.987 | pathogenic | -1.825 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.