Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33264 | 100015;100016;100017 | chr2:178537417;178537416;178537415 | chr2:179402144;179402143;179402142 |
N2AB | 31623 | 95092;95093;95094 | chr2:178537417;178537416;178537415 | chr2:179402144;179402143;179402142 |
N2A | 30696 | 92311;92312;92313 | chr2:178537417;178537416;178537415 | chr2:179402144;179402143;179402142 |
N2B | 24199 | 72820;72821;72822 | chr2:178537417;178537416;178537415 | chr2:179402144;179402143;179402142 |
Novex-1 | 24324 | 73195;73196;73197 | chr2:178537417;178537416;178537415 | chr2:179402144;179402143;179402142 |
Novex-2 | 24391 | 73396;73397;73398 | chr2:178537417;178537416;178537415 | chr2:179402144;179402143;179402142 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | None | None | 0.997 | N | 0.685 | 0.288 | 0.229924730088 | gnomAD-4.0.0 | 1.59875E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43926E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7554 | likely_pathogenic | 0.7637 | pathogenic | -1.159 | Destabilizing | 0.996 | D | 0.718 | prob.delet. | None | None | None | None | N |
H/C | 0.4945 | ambiguous | 0.5463 | ambiguous | -0.181 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
H/D | 0.3249 | likely_benign | 0.289 | benign | -1.259 | Destabilizing | 0.937 | D | 0.672 | neutral | N | 0.399352327 | None | None | N |
H/E | 0.8023 | likely_pathogenic | 0.7616 | pathogenic | -1.112 | Destabilizing | 0.982 | D | 0.605 | neutral | None | None | None | None | N |
H/F | 0.6886 | likely_pathogenic | 0.7054 | pathogenic | 0.451 | Stabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
H/G | 0.8387 | likely_pathogenic | 0.839 | pathogenic | -1.576 | Destabilizing | 0.982 | D | 0.707 | prob.neutral | None | None | None | None | N |
H/I | 0.8368 | likely_pathogenic | 0.8353 | pathogenic | 0.04 | Stabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
H/K | 0.9138 | likely_pathogenic | 0.9041 | pathogenic | -0.714 | Destabilizing | 0.981 | D | 0.705 | prob.neutral | None | None | None | None | N |
H/L | 0.4308 | ambiguous | 0.4542 | ambiguous | 0.04 | Stabilizing | 0.988 | D | 0.796 | deleterious | N | 0.485528199 | None | None | N |
H/M | 0.7435 | likely_pathogenic | 0.7461 | pathogenic | -0.076 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
H/N | 0.1309 | likely_benign | 0.1406 | benign | -1.062 | Destabilizing | 0.143 | N | 0.327 | neutral | N | 0.492324856 | None | None | N |
H/P | 0.8635 | likely_pathogenic | 0.8898 | pathogenic | -0.344 | Destabilizing | 0.998 | D | 0.805 | deleterious | N | 0.485274709 | None | None | N |
H/Q | 0.628 | likely_pathogenic | 0.5941 | pathogenic | -0.731 | Destabilizing | 0.997 | D | 0.685 | prob.neutral | N | 0.511777408 | None | None | N |
H/R | 0.8144 | likely_pathogenic | 0.8229 | pathogenic | -1.31 | Destabilizing | 0.988 | D | 0.641 | neutral | N | 0.493615722 | None | None | N |
H/S | 0.5343 | ambiguous | 0.5335 | ambiguous | -1.008 | Destabilizing | 0.982 | D | 0.657 | neutral | None | None | None | None | N |
H/T | 0.7849 | likely_pathogenic | 0.7759 | pathogenic | -0.746 | Destabilizing | 0.975 | D | 0.753 | deleterious | None | None | None | None | N |
H/V | 0.7695 | likely_pathogenic | 0.7772 | pathogenic | -0.344 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
H/W | 0.8233 | likely_pathogenic | 0.8369 | pathogenic | 0.819 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
H/Y | 0.2992 | likely_benign | 0.3051 | benign | 0.746 | Stabilizing | 0.997 | D | 0.662 | neutral | N | 0.485274709 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.