Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33272 | 100039;100040;100041 | chr2:178537393;178537392;178537391 | chr2:179402120;179402119;179402118 |
N2AB | 31631 | 95116;95117;95118 | chr2:178537393;178537392;178537391 | chr2:179402120;179402119;179402118 |
N2A | 30704 | 92335;92336;92337 | chr2:178537393;178537392;178537391 | chr2:179402120;179402119;179402118 |
N2B | 24207 | 72844;72845;72846 | chr2:178537393;178537392;178537391 | chr2:179402120;179402119;179402118 |
Novex-1 | 24332 | 73219;73220;73221 | chr2:178537393;178537392;178537391 | chr2:179402120;179402119;179402118 |
Novex-2 | 24399 | 73420;73421;73422 | chr2:178537393;178537392;178537391 | chr2:179402120;179402119;179402118 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs397517780 | -1.812 | 1.0 | N | 0.773 | 0.425 | 0.659830528944 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.03E-06 | 0 |
L/F | rs397517780 | -1.812 | 1.0 | N | 0.773 | 0.425 | 0.659830528944 | gnomAD-4.0.0 | 1.5824E-05 | None | None | None | None | N | None | 3.00517E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80794E-05 | 0 | 3.332E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8612 | likely_pathogenic | 0.852 | pathogenic | -2.56 | Highly Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
L/C | 0.8743 | likely_pathogenic | 0.8726 | pathogenic | -2.071 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/D | 0.9988 | likely_pathogenic | 0.9985 | pathogenic | -2.867 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/E | 0.9937 | likely_pathogenic | 0.9923 | pathogenic | -2.748 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
L/F | 0.5684 | likely_pathogenic | 0.5877 | pathogenic | -1.77 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.494935948 | None | None | N |
L/G | 0.9775 | likely_pathogenic | 0.9745 | pathogenic | -3.024 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/H | 0.9838 | likely_pathogenic | 0.9822 | pathogenic | -2.357 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.495442927 | None | None | N |
L/I | 0.1802 | likely_benign | 0.1604 | benign | -1.263 | Destabilizing | 0.999 | D | 0.537 | neutral | N | 0.492401053 | None | None | N |
L/K | 0.9899 | likely_pathogenic | 0.9865 | pathogenic | -1.997 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
L/M | 0.2378 | likely_benign | 0.2481 | benign | -1.147 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
L/N | 0.9913 | likely_pathogenic | 0.9884 | pathogenic | -2.115 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/P | 0.9972 | likely_pathogenic | 0.9972 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.495189438 | None | None | N |
L/Q | 0.9669 | likely_pathogenic | 0.9639 | pathogenic | -2.172 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
L/R | 0.9817 | likely_pathogenic | 0.9772 | pathogenic | -1.466 | Destabilizing | 1.0 | D | 0.782 | deleterious | N | 0.495189438 | None | None | N |
L/S | 0.9824 | likely_pathogenic | 0.9814 | pathogenic | -2.779 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/T | 0.95 | likely_pathogenic | 0.9426 | pathogenic | -2.526 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/V | 0.2597 | likely_benign | 0.2527 | benign | -1.672 | Destabilizing | 0.999 | D | 0.534 | neutral | N | 0.473349519 | None | None | N |
L/W | 0.955 | likely_pathogenic | 0.9572 | pathogenic | -2.041 | Highly Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
L/Y | 0.9581 | likely_pathogenic | 0.9555 | pathogenic | -1.811 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.