Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33287 | 100084;100085;100086 | chr2:178537348;178537347;178537346 | chr2:179402075;179402074;179402073 |
N2AB | 31646 | 95161;95162;95163 | chr2:178537348;178537347;178537346 | chr2:179402075;179402074;179402073 |
N2A | 30719 | 92380;92381;92382 | chr2:178537348;178537347;178537346 | chr2:179402075;179402074;179402073 |
N2B | 24222 | 72889;72890;72891 | chr2:178537348;178537347;178537346 | chr2:179402075;179402074;179402073 |
Novex-1 | 24347 | 73264;73265;73266 | chr2:178537348;178537347;178537346 | chr2:179402075;179402074;179402073 |
Novex-2 | 24414 | 73465;73466;73467 | chr2:178537348;178537347;178537346 | chr2:179402075;179402074;179402073 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | rs758948672 | -1.69 | 0.369 | N | 0.665 | 0.461 | 0.580477355671 | gnomAD-2.1.1 | 1.54E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.21E-05 | 0 |
I/M | rs758948672 | -1.69 | 0.369 | N | 0.665 | 0.461 | 0.580477355671 | gnomAD-4.0.0 | 5.36517E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.41212E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9854 | likely_pathogenic | 0.9892 | pathogenic | -2.597 | Highly Destabilizing | 0.851 | D | 0.579 | neutral | None | None | None | None | N |
I/C | 0.9827 | likely_pathogenic | 0.9887 | pathogenic | -1.849 | Destabilizing | 0.997 | D | 0.649 | neutral | None | None | None | None | N |
I/D | 0.9992 | likely_pathogenic | 0.9993 | pathogenic | -2.682 | Highly Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
I/E | 0.9976 | likely_pathogenic | 0.9981 | pathogenic | -2.55 | Highly Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
I/F | 0.6868 | likely_pathogenic | 0.7423 | pathogenic | -1.562 | Destabilizing | 0.976 | D | 0.658 | neutral | None | None | None | None | N |
I/G | 0.9975 | likely_pathogenic | 0.9982 | pathogenic | -3.044 | Highly Destabilizing | 0.988 | D | 0.675 | neutral | None | None | None | None | N |
I/H | 0.9972 | likely_pathogenic | 0.9981 | pathogenic | -2.214 | Highly Destabilizing | 0.997 | D | 0.669 | neutral | None | None | None | None | N |
I/K | 0.9955 | likely_pathogenic | 0.9966 | pathogenic | -1.941 | Destabilizing | 0.982 | D | 0.686 | prob.neutral | N | 0.499555347 | None | None | N |
I/L | 0.4728 | ambiguous | 0.5004 | ambiguous | -1.341 | Destabilizing | 0.004 | N | 0.606 | neutral | N | 0.496259983 | None | None | N |
I/M | 0.46 | ambiguous | 0.522 | ambiguous | -1.276 | Destabilizing | 0.369 | N | 0.665 | neutral | N | 0.499048368 | None | None | N |
I/N | 0.9811 | likely_pathogenic | 0.9842 | pathogenic | -2.026 | Highly Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/P | 0.9951 | likely_pathogenic | 0.9959 | pathogenic | -1.738 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/Q | 0.9961 | likely_pathogenic | 0.9972 | pathogenic | -2.073 | Highly Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
I/R | 0.9939 | likely_pathogenic | 0.9955 | pathogenic | -1.406 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | N | 0.499555347 | None | None | N |
I/S | 0.9868 | likely_pathogenic | 0.9899 | pathogenic | -2.7 | Highly Destabilizing | 0.976 | D | 0.629 | neutral | None | None | None | None | N |
I/T | 0.9765 | likely_pathogenic | 0.9842 | pathogenic | -2.449 | Highly Destabilizing | 0.721 | D | 0.645 | neutral | N | 0.499048368 | None | None | N |
I/V | 0.2285 | likely_benign | 0.2667 | benign | -1.738 | Destabilizing | None | N | 0.412 | neutral | N | 0.474594739 | None | None | N |
I/W | 0.9939 | likely_pathogenic | 0.9954 | pathogenic | -1.783 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
I/Y | 0.9696 | likely_pathogenic | 0.9764 | pathogenic | -1.592 | Destabilizing | 0.791 | D | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.