Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33293 | 100102;100103;100104 | chr2:178537232;178537231;178537230 | chr2:179401959;179401958;179401957 |
N2AB | 31652 | 95179;95180;95181 | chr2:178537232;178537231;178537230 | chr2:179401959;179401958;179401957 |
N2A | 30725 | 92398;92399;92400 | chr2:178537232;178537231;178537230 | chr2:179401959;179401958;179401957 |
N2B | 24228 | 72907;72908;72909 | chr2:178537232;178537231;178537230 | chr2:179401959;179401958;179401957 |
Novex-1 | 24353 | 73282;73283;73284 | chr2:178537232;178537231;178537230 | chr2:179401959;179401958;179401957 |
Novex-2 | 24420 | 73483;73484;73485 | chr2:178537232;178537231;178537230 | chr2:179401959;179401958;179401957 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.959 | N | 0.489 | 0.247 | 0.323886383625 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/I | None | None | 0.061 | N | 0.36 | 0.187 | 0.455722563999 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2625 | likely_benign | 0.3164 | benign | -0.622 | Destabilizing | 0.863 | D | 0.463 | neutral | None | None | None | None | I |
K/C | 0.5855 | likely_pathogenic | 0.6458 | pathogenic | -0.706 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
K/D | 0.7556 | likely_pathogenic | 0.8235 | pathogenic | -0.503 | Destabilizing | 0.969 | D | 0.593 | neutral | None | None | None | None | I |
K/E | 0.2147 | likely_benign | 0.2444 | benign | -0.399 | Destabilizing | 0.959 | D | 0.489 | neutral | N | 0.466582618 | None | None | I |
K/F | 0.6997 | likely_pathogenic | 0.7827 | pathogenic | -0.345 | Destabilizing | 0.982 | D | 0.664 | neutral | None | None | None | None | I |
K/G | 0.5123 | ambiguous | 0.5904 | pathogenic | -0.991 | Destabilizing | 0.969 | D | 0.632 | neutral | None | None | None | None | I |
K/H | 0.4193 | ambiguous | 0.4828 | ambiguous | -1.411 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | I |
K/I | 0.1975 | likely_benign | 0.2523 | benign | 0.336 | Stabilizing | 0.061 | N | 0.36 | neutral | N | 0.461532228 | None | None | I |
K/L | 0.2988 | likely_benign | 0.3799 | ambiguous | 0.336 | Stabilizing | 0.02 | N | 0.321 | neutral | None | None | None | None | I |
K/M | 0.168 | likely_benign | 0.2078 | benign | 0.301 | Stabilizing | 0.982 | D | 0.576 | neutral | None | None | None | None | I |
K/N | 0.4798 | ambiguous | 0.576 | pathogenic | -0.7 | Destabilizing | 0.959 | D | 0.475 | neutral | N | 0.468103555 | None | None | I |
K/P | 0.5099 | ambiguous | 0.5608 | ambiguous | 0.047 | Stabilizing | 0.997 | D | 0.593 | neutral | None | None | None | None | I |
K/Q | 0.1429 | likely_benign | 0.1512 | benign | -0.81 | Destabilizing | 0.996 | D | 0.493 | neutral | N | 0.489601477 | None | None | I |
K/R | 0.0888 | likely_benign | 0.0971 | benign | -0.818 | Destabilizing | 0.959 | D | 0.511 | neutral | N | 0.449544365 | None | None | I |
K/S | 0.4014 | ambiguous | 0.4809 | ambiguous | -1.311 | Destabilizing | 0.884 | D | 0.451 | neutral | None | None | None | None | I |
K/T | 0.1387 | likely_benign | 0.1969 | benign | -1.005 | Destabilizing | 0.134 | N | 0.285 | neutral | N | 0.468650201 | None | None | I |
K/V | 0.2122 | likely_benign | 0.2656 | benign | 0.047 | Stabilizing | 0.759 | D | 0.419 | neutral | None | None | None | None | I |
K/W | 0.854 | likely_pathogenic | 0.9003 | pathogenic | -0.234 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | I |
K/Y | 0.6307 | likely_pathogenic | 0.7058 | pathogenic | 0.073 | Stabilizing | 0.997 | D | 0.646 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.