Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33297 | 100114;100115;100116 | chr2:178537220;178537219;178537218 | chr2:179401947;179401946;179401945 |
N2AB | 31656 | 95191;95192;95193 | chr2:178537220;178537219;178537218 | chr2:179401947;179401946;179401945 |
N2A | 30729 | 92410;92411;92412 | chr2:178537220;178537219;178537218 | chr2:179401947;179401946;179401945 |
N2B | 24232 | 72919;72920;72921 | chr2:178537220;178537219;178537218 | chr2:179401947;179401946;179401945 |
Novex-1 | 24357 | 73294;73295;73296 | chr2:178537220;178537219;178537218 | chr2:179401947;179401946;179401945 |
Novex-2 | 24424 | 73495;73496;73497 | chr2:178537220;178537219;178537218 | chr2:179401947;179401946;179401945 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs369205591 | -0.168 | 0.998 | N | 0.734 | 0.441 | None | gnomAD-2.1.1 | 8.17E-06 | None | None | None | None | I | None | 0 | 2.94E-05 | None | 0 | 0 | None | 0 | None | 0 | 9.02E-06 | 0 |
P/L | rs369205591 | -0.168 | 0.998 | N | 0.734 | 0.441 | None | gnomAD-4.0.0 | 1.61869E-06 | None | None | None | None | I | None | 0 | 2.31653E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2562 | likely_benign | 0.2611 | benign | -0.519 | Destabilizing | 0.984 | D | 0.688 | prob.neutral | N | 0.51656697 | None | None | I |
P/C | 0.83 | likely_pathogenic | 0.8567 | pathogenic | -0.787 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
P/D | 0.6065 | likely_pathogenic | 0.579 | pathogenic | -0.147 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | I |
P/E | 0.4896 | ambiguous | 0.4651 | ambiguous | -0.234 | Destabilizing | 0.998 | D | 0.762 | deleterious | None | None | None | None | I |
P/F | 0.8604 | likely_pathogenic | 0.8759 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
P/G | 0.6483 | likely_pathogenic | 0.6313 | pathogenic | -0.664 | Destabilizing | 0.994 | D | 0.731 | prob.delet. | None | None | None | None | I |
P/H | 0.4873 | ambiguous | 0.5055 | ambiguous | -0.083 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/I | 0.7289 | likely_pathogenic | 0.7513 | pathogenic | -0.276 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
P/K | 0.5974 | likely_pathogenic | 0.5844 | pathogenic | -0.501 | Destabilizing | 0.998 | D | 0.756 | deleterious | None | None | None | None | I |
P/L | 0.4012 | ambiguous | 0.4339 | ambiguous | -0.276 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | N | 0.494113713 | None | None | I |
P/M | 0.6965 | likely_pathogenic | 0.7231 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
P/N | 0.5669 | likely_pathogenic | 0.5483 | ambiguous | -0.341 | Destabilizing | 0.998 | D | 0.746 | deleterious | None | None | None | None | I |
P/Q | 0.3843 | ambiguous | 0.3944 | ambiguous | -0.523 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | N | 0.504249613 | None | None | I |
P/R | 0.481 | ambiguous | 0.4866 | ambiguous | -0.013 | Destabilizing | 0.999 | D | 0.748 | deleterious | N | 0.517327439 | None | None | I |
P/S | 0.3608 | ambiguous | 0.3529 | ambiguous | -0.743 | Destabilizing | 0.79 | D | 0.383 | neutral | N | 0.513453098 | None | None | I |
P/T | 0.3267 | likely_benign | 0.3225 | benign | -0.723 | Destabilizing | 0.995 | D | 0.765 | deleterious | N | 0.513453098 | None | None | I |
P/V | 0.5901 | likely_pathogenic | 0.6098 | pathogenic | -0.323 | Destabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | I |
P/W | 0.9436 | likely_pathogenic | 0.9528 | pathogenic | -0.651 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
P/Y | 0.817 | likely_pathogenic | 0.8318 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.