Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33303 | 100132;100133;100134 | chr2:178537202;178537201;178537200 | chr2:179401929;179401928;179401927 |
N2AB | 31662 | 95209;95210;95211 | chr2:178537202;178537201;178537200 | chr2:179401929;179401928;179401927 |
N2A | 30735 | 92428;92429;92430 | chr2:178537202;178537201;178537200 | chr2:179401929;179401928;179401927 |
N2B | 24238 | 72937;72938;72939 | chr2:178537202;178537201;178537200 | chr2:179401929;179401928;179401927 |
Novex-1 | 24363 | 73312;73313;73314 | chr2:178537202;178537201;178537200 | chr2:179401929;179401928;179401927 |
Novex-2 | 24430 | 73513;73514;73515 | chr2:178537202;178537201;178537200 | chr2:179401929;179401928;179401927 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs746345868 | -0.776 | 0.026 | N | 0.243 | 0.106 | 0.248417906384 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.67112E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5426 | ambiguous | 0.5021 | ambiguous | -1.634 | Destabilizing | 0.851 | D | 0.459 | neutral | None | None | None | None | N |
L/C | 0.7196 | likely_pathogenic | 0.6921 | pathogenic | -1.096 | Destabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | N |
L/D | 0.9506 | likely_pathogenic | 0.943 | pathogenic | -0.801 | Destabilizing | 0.952 | D | 0.661 | neutral | None | None | None | None | N |
L/E | 0.7433 | likely_pathogenic | 0.7308 | pathogenic | -0.745 | Destabilizing | 0.261 | N | 0.405 | neutral | None | None | None | None | N |
L/F | 0.3468 | ambiguous | 0.3004 | benign | -0.965 | Destabilizing | 0.976 | D | 0.532 | neutral | None | None | None | None | N |
L/G | 0.8874 | likely_pathogenic | 0.8671 | pathogenic | -2.01 | Highly Destabilizing | 0.988 | D | 0.661 | neutral | None | None | None | None | N |
L/H | 0.6283 | likely_pathogenic | 0.5804 | pathogenic | -1.282 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | None | None | None | None | N |
L/I | 0.1088 | likely_benign | 0.0954 | benign | -0.653 | Destabilizing | 0.026 | N | 0.211 | neutral | N | 0.381007 | None | None | N |
L/K | 0.6003 | likely_pathogenic | 0.5875 | pathogenic | -1.021 | Destabilizing | 0.976 | D | 0.547 | neutral | None | None | None | None | N |
L/M | 0.1881 | likely_benign | 0.1655 | benign | -0.637 | Destabilizing | 0.976 | D | 0.524 | neutral | None | None | None | None | N |
L/N | 0.7045 | likely_pathogenic | 0.7072 | pathogenic | -0.889 | Destabilizing | 0.988 | D | 0.663 | neutral | None | None | None | None | N |
L/P | 0.8827 | likely_pathogenic | 0.8633 | pathogenic | -0.949 | Destabilizing | 0.995 | D | 0.663 | neutral | N | 0.478344333 | None | None | N |
L/Q | 0.4345 | ambiguous | 0.4051 | ambiguous | -0.974 | Destabilizing | 0.968 | D | 0.602 | neutral | N | 0.47672818 | None | None | N |
L/R | 0.5559 | ambiguous | 0.5161 | ambiguous | -0.61 | Destabilizing | 0.968 | D | 0.605 | neutral | N | 0.465529751 | None | None | N |
L/S | 0.6667 | likely_pathogenic | 0.6126 | pathogenic | -1.617 | Destabilizing | 0.976 | D | 0.541 | neutral | None | None | None | None | N |
L/T | 0.4218 | ambiguous | 0.3805 | ambiguous | -1.436 | Destabilizing | 0.919 | D | 0.496 | neutral | None | None | None | None | N |
L/V | 0.1245 | likely_benign | 0.1038 | benign | -0.949 | Destabilizing | 0.026 | N | 0.243 | neutral | N | 0.356647273 | None | None | N |
L/W | 0.68 | likely_pathogenic | 0.6185 | pathogenic | -1.071 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
L/Y | 0.711 | likely_pathogenic | 0.6571 | pathogenic | -0.821 | Destabilizing | 0.996 | D | 0.549 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.