Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33304 | 100135;100136;100137 | chr2:178537199;178537198;178537197 | chr2:179401926;179401925;179401924 |
N2AB | 31663 | 95212;95213;95214 | chr2:178537199;178537198;178537197 | chr2:179401926;179401925;179401924 |
N2A | 30736 | 92431;92432;92433 | chr2:178537199;178537198;178537197 | chr2:179401926;179401925;179401924 |
N2B | 24239 | 72940;72941;72942 | chr2:178537199;178537198;178537197 | chr2:179401926;179401925;179401924 |
Novex-1 | 24364 | 73315;73316;73317 | chr2:178537199;178537198;178537197 | chr2:179401926;179401925;179401924 |
Novex-2 | 24431 | 73516;73517;73518 | chr2:178537199;178537198;178537197 | chr2:179401926;179401925;179401924 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1691995704 | None | 1.0 | N | 0.775 | 0.511 | 0.645115249394 | gnomAD-4.0.0 | 1.59635E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.7767E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.701 | likely_pathogenic | 0.6807 | pathogenic | -1.204 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | I |
L/C | 0.8754 | likely_pathogenic | 0.8603 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
L/D | 0.9524 | likely_pathogenic | 0.9367 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
L/E | 0.8155 | likely_pathogenic | 0.7948 | pathogenic | -0.463 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
L/F | 0.4092 | ambiguous | 0.3523 | ambiguous | -0.941 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.476498893 | None | None | I |
L/G | 0.8187 | likely_pathogenic | 0.8014 | pathogenic | -1.465 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
L/H | 0.7081 | likely_pathogenic | 0.6739 | pathogenic | -0.682 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
L/I | 0.3418 | ambiguous | 0.3143 | benign | -0.597 | Destabilizing | 0.999 | D | 0.464 | neutral | None | None | None | None | I |
L/K | 0.7404 | likely_pathogenic | 0.7336 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
L/M | 0.2745 | likely_benign | 0.253 | benign | -0.442 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | N | 0.495007296 | None | None | I |
L/N | 0.764 | likely_pathogenic | 0.7241 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
L/P | 0.9517 | likely_pathogenic | 0.9375 | pathogenic | -0.766 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
L/Q | 0.5027 | ambiguous | 0.492 | ambiguous | -0.602 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
L/R | 0.6695 | likely_pathogenic | 0.6584 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
L/S | 0.7222 | likely_pathogenic | 0.6761 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.775 | deleterious | N | 0.399688761 | None | None | I |
L/T | 0.5273 | ambiguous | 0.4967 | ambiguous | -0.918 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
L/V | 0.3648 | ambiguous | 0.3267 | benign | -0.766 | Destabilizing | 0.999 | D | 0.462 | neutral | N | 0.476152177 | None | None | I |
L/W | 0.7484 | likely_pathogenic | 0.7021 | pathogenic | -0.939 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | N | 0.467167334 | None | None | I |
L/Y | 0.7897 | likely_pathogenic | 0.7353 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.