Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33327 | 100204;100205;100206 | chr2:178537130;178537129;178537128 | chr2:179401857;179401856;179401855 |
N2AB | 31686 | 95281;95282;95283 | chr2:178537130;178537129;178537128 | chr2:179401857;179401856;179401855 |
N2A | 30759 | 92500;92501;92502 | chr2:178537130;178537129;178537128 | chr2:179401857;179401856;179401855 |
N2B | 24262 | 73009;73010;73011 | chr2:178537130;178537129;178537128 | chr2:179401857;179401856;179401855 |
Novex-1 | 24387 | 73384;73385;73386 | chr2:178537130;178537129;178537128 | chr2:179401857;179401856;179401855 |
Novex-2 | 24454 | 73585;73586;73587 | chr2:178537130;178537129;178537128 | chr2:179401857;179401856;179401855 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs1219652014 | -0.911 | 0.099 | N | 0.434 | 0.113 | 0.400756358115 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/L | rs1219652014 | -0.911 | 0.099 | N | 0.434 | 0.113 | 0.400756358115 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | N | None | 0 | 2.28948E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7097 | likely_pathogenic | 0.613 | pathogenic | -2.227 | Highly Destabilizing | 0.201 | N | 0.491 | neutral | N | 0.50866724 | None | None | N |
V/C | 0.9229 | likely_pathogenic | 0.9133 | pathogenic | -2.08 | Highly Destabilizing | 0.992 | D | 0.649 | neutral | None | None | None | None | N |
V/D | 0.9539 | likely_pathogenic | 0.9246 | pathogenic | -2.669 | Highly Destabilizing | 0.85 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/E | 0.854 | likely_pathogenic | 0.7807 | pathogenic | -2.52 | Highly Destabilizing | 0.549 | D | 0.678 | prob.neutral | N | 0.483536722 | None | None | N |
V/F | 0.5757 | likely_pathogenic | 0.4616 | ambiguous | -1.492 | Destabilizing | 0.85 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/G | 0.8708 | likely_pathogenic | 0.836 | pathogenic | -2.679 | Highly Destabilizing | 0.379 | N | 0.706 | prob.neutral | N | 0.488485535 | None | None | N |
V/H | 0.9403 | likely_pathogenic | 0.9062 | pathogenic | -2.16 | Highly Destabilizing | 0.977 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/I | 0.0788 | likely_benign | 0.0749 | benign | -0.993 | Destabilizing | 0.001 | N | 0.187 | neutral | None | None | None | None | N |
V/K | 0.8487 | likely_pathogenic | 0.7719 | pathogenic | -1.854 | Destabilizing | 0.447 | N | 0.69 | prob.neutral | None | None | None | None | N |
V/L | 0.4763 | ambiguous | 0.3661 | ambiguous | -0.993 | Destabilizing | 0.099 | N | 0.434 | neutral | N | 0.459470571 | None | None | N |
V/M | 0.3949 | ambiguous | 0.3063 | benign | -1.126 | Destabilizing | 0.81 | D | 0.67 | neutral | N | 0.50970739 | None | None | N |
V/N | 0.8711 | likely_pathogenic | 0.8165 | pathogenic | -2.069 | Highly Destabilizing | 0.739 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/P | 0.9965 | likely_pathogenic | 0.9924 | pathogenic | -1.377 | Destabilizing | 0.92 | D | 0.674 | neutral | None | None | None | None | N |
V/Q | 0.8308 | likely_pathogenic | 0.7587 | pathogenic | -2.057 | Highly Destabilizing | 0.85 | D | 0.655 | neutral | None | None | None | None | N |
V/R | 0.7707 | likely_pathogenic | 0.6807 | pathogenic | -1.476 | Destabilizing | 0.85 | D | 0.702 | prob.neutral | None | None | None | None | N |
V/S | 0.7976 | likely_pathogenic | 0.7505 | pathogenic | -2.706 | Highly Destabilizing | 0.021 | N | 0.551 | neutral | None | None | None | None | N |
V/T | 0.5616 | ambiguous | 0.4885 | ambiguous | -2.427 | Highly Destabilizing | 0.447 | N | 0.609 | neutral | None | None | None | None | N |
V/W | 0.9746 | likely_pathogenic | 0.9581 | pathogenic | -1.83 | Destabilizing | 0.992 | D | 0.692 | prob.neutral | None | None | None | None | N |
V/Y | 0.9115 | likely_pathogenic | 0.8668 | pathogenic | -1.529 | Destabilizing | 0.972 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.