Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33332 | 100219;100220;100221 | chr2:178537115;178537114;178537113 | chr2:179401842;179401841;179401840 |
N2AB | 31691 | 95296;95297;95298 | chr2:178537115;178537114;178537113 | chr2:179401842;179401841;179401840 |
N2A | 30764 | 92515;92516;92517 | chr2:178537115;178537114;178537113 | chr2:179401842;179401841;179401840 |
N2B | 24267 | 73024;73025;73026 | chr2:178537115;178537114;178537113 | chr2:179401842;179401841;179401840 |
Novex-1 | 24392 | 73399;73400;73401 | chr2:178537115;178537114;178537113 | chr2:179401842;179401841;179401840 |
Novex-2 | 24459 | 73600;73601;73602 | chr2:178537115;178537114;178537113 | chr2:179401842;179401841;179401840 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1407789736 | -1.485 | 1.0 | N | 0.691 | 0.574 | 0.503311249505 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
E/G | rs1407789736 | -1.485 | 1.0 | N | 0.691 | 0.574 | 0.503311249505 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs1407789736 | -1.485 | 1.0 | N | 0.691 | 0.574 | 0.503311249505 | gnomAD-4.0.0 | 4.3393E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93423E-06 | 0 | 0 |
E/K | rs1327630158 | -0.817 | 0.999 | N | 0.573 | 0.438 | 0.424908009808 | gnomAD-4.0.0 | 1.59249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85966E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2844 | likely_benign | 0.2845 | benign | -0.818 | Destabilizing | 0.999 | D | 0.656 | neutral | N | 0.473561285 | None | None | N |
E/C | 0.9494 | likely_pathogenic | 0.9564 | pathogenic | -0.419 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/D | 0.3324 | likely_benign | 0.2937 | benign | -1.074 | Destabilizing | 0.999 | D | 0.454 | neutral | N | 0.42859309 | None | None | N |
E/F | 0.9274 | likely_pathogenic | 0.9301 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/G | 0.503 | ambiguous | 0.5027 | ambiguous | -1.178 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.479512767 | None | None | N |
E/H | 0.7938 | likely_pathogenic | 0.8019 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
E/I | 0.5878 | likely_pathogenic | 0.5957 | pathogenic | 0.16 | Stabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
E/K | 0.3074 | likely_benign | 0.3323 | benign | -0.39 | Destabilizing | 0.999 | D | 0.573 | neutral | N | 0.515094567 | None | None | N |
E/L | 0.6014 | likely_pathogenic | 0.5925 | pathogenic | 0.16 | Stabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
E/M | 0.7041 | likely_pathogenic | 0.6983 | pathogenic | 0.522 | Stabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
E/N | 0.5587 | ambiguous | 0.5644 | pathogenic | -0.967 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
E/P | 0.5853 | likely_pathogenic | 0.5659 | pathogenic | -0.145 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/Q | 0.2865 | likely_benign | 0.2995 | benign | -0.846 | Destabilizing | 1.0 | D | 0.603 | neutral | N | 0.50728316 | None | None | N |
E/R | 0.5313 | ambiguous | 0.5666 | pathogenic | -0.046 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/S | 0.4607 | ambiguous | 0.4692 | ambiguous | -1.238 | Destabilizing | 0.999 | D | 0.605 | neutral | None | None | None | None | N |
E/T | 0.4994 | ambiguous | 0.4965 | ambiguous | -0.935 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/V | 0.3985 | ambiguous | 0.3972 | ambiguous | -0.145 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.500250368 | None | None | N |
E/W | 0.9808 | likely_pathogenic | 0.9812 | pathogenic | 0.147 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/Y | 0.9025 | likely_pathogenic | 0.9045 | pathogenic | 0.117 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.