Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33334 | 100225;100226;100227 | chr2:178537109;178537108;178537107 | chr2:179401836;179401835;179401834 |
N2AB | 31693 | 95302;95303;95304 | chr2:178537109;178537108;178537107 | chr2:179401836;179401835;179401834 |
N2A | 30766 | 92521;92522;92523 | chr2:178537109;178537108;178537107 | chr2:179401836;179401835;179401834 |
N2B | 24269 | 73030;73031;73032 | chr2:178537109;178537108;178537107 | chr2:179401836;179401835;179401834 |
Novex-1 | 24394 | 73405;73406;73407 | chr2:178537109;178537108;178537107 | chr2:179401836;179401835;179401834 |
Novex-2 | 24461 | 73606;73607;73608 | chr2:178537109;178537108;178537107 | chr2:179401836;179401835;179401834 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.716 | N | 0.473 | 0.299 | 0.201204373187 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
K/R | rs1178919533 | None | 0.035 | N | 0.305 | 0.115 | 0.222439326576 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/R | rs1178919533 | None | 0.035 | N | 0.305 | 0.115 | 0.222439326576 | gnomAD-4.0.0 | 2.5638E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78794E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4083 | ambiguous | 0.3781 | ambiguous | -0.015 | Destabilizing | 0.87 | D | 0.499 | neutral | None | None | None | None | N |
K/C | 0.8505 | likely_pathogenic | 0.8338 | pathogenic | -0.33 | Destabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/D | 0.6855 | likely_pathogenic | 0.6663 | pathogenic | -0.121 | Destabilizing | 0.959 | D | 0.573 | neutral | None | None | None | None | N |
K/E | 0.2118 | likely_benign | 0.1914 | benign | -0.132 | Destabilizing | 0.716 | D | 0.473 | neutral | N | 0.468012696 | None | None | N |
K/F | 0.9003 | likely_pathogenic | 0.8875 | pathogenic | -0.309 | Destabilizing | 0.994 | D | 0.638 | neutral | None | None | None | None | N |
K/G | 0.4941 | ambiguous | 0.4643 | ambiguous | -0.175 | Destabilizing | 0.959 | D | 0.449 | neutral | None | None | None | None | N |
K/H | 0.5428 | ambiguous | 0.4899 | ambiguous | -0.401 | Destabilizing | 0.994 | D | 0.575 | neutral | None | None | None | None | N |
K/I | 0.5008 | ambiguous | 0.4772 | ambiguous | 0.322 | Stabilizing | 0.979 | D | 0.644 | neutral | None | None | None | None | N |
K/L | 0.5163 | ambiguous | 0.5072 | ambiguous | 0.322 | Stabilizing | 0.959 | D | 0.449 | neutral | None | None | None | None | N |
K/M | 0.4036 | ambiguous | 0.3773 | ambiguous | 0.105 | Stabilizing | 0.998 | D | 0.585 | neutral | N | 0.473445926 | None | None | N |
K/N | 0.5461 | ambiguous | 0.5245 | ambiguous | 0.101 | Stabilizing | 0.946 | D | 0.551 | neutral | N | 0.463238808 | None | None | N |
K/P | 0.787 | likely_pathogenic | 0.8428 | pathogenic | 0.235 | Stabilizing | 0.979 | D | 0.559 | neutral | None | None | None | None | N |
K/Q | 0.2016 | likely_benign | 0.1721 | benign | -0.084 | Destabilizing | 0.946 | D | 0.543 | neutral | N | 0.511899546 | None | None | N |
K/R | 0.1066 | likely_benign | 0.0963 | benign | -0.108 | Destabilizing | 0.035 | N | 0.305 | neutral | N | 0.495468656 | None | None | N |
K/S | 0.4967 | ambiguous | 0.4645 | ambiguous | -0.334 | Destabilizing | 0.87 | D | 0.499 | neutral | None | None | None | None | N |
K/T | 0.2447 | likely_benign | 0.2178 | benign | -0.213 | Destabilizing | 0.946 | D | 0.533 | neutral | N | 0.489004044 | None | None | N |
K/V | 0.4223 | ambiguous | 0.3787 | ambiguous | 0.235 | Stabilizing | 0.959 | D | 0.575 | neutral | None | None | None | None | N |
K/W | 0.9056 | likely_pathogenic | 0.8933 | pathogenic | -0.351 | Destabilizing | 0.998 | D | 0.706 | prob.neutral | None | None | None | None | N |
K/Y | 0.841 | likely_pathogenic | 0.8238 | pathogenic | 0.004 | Stabilizing | 0.979 | D | 0.608 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.