Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33341 | 100246;100247;100248 | chr2:178537088;178537087;178537086 | chr2:179401815;179401814;179401813 |
N2AB | 31700 | 95323;95324;95325 | chr2:178537088;178537087;178537086 | chr2:179401815;179401814;179401813 |
N2A | 30773 | 92542;92543;92544 | chr2:178537088;178537087;178537086 | chr2:179401815;179401814;179401813 |
N2B | 24276 | 73051;73052;73053 | chr2:178537088;178537087;178537086 | chr2:179401815;179401814;179401813 |
Novex-1 | 24401 | 73426;73427;73428 | chr2:178537088;178537087;178537086 | chr2:179401815;179401814;179401813 |
Novex-2 | 24468 | 73627;73628;73629 | chr2:178537088;178537087;178537086 | chr2:179401815;179401814;179401813 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 1.0 | N | 0.811 | 0.532 | 0.641048165634 | gnomAD-4.0.0 | 1.59263E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85979E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.5092 | ambiguous | 0.532 | ambiguous | -1.195 | Destabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | I |
L/C | 0.7796 | likely_pathogenic | 0.7661 | pathogenic | -0.731 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | I |
L/D | 0.9276 | likely_pathogenic | 0.9271 | pathogenic | -0.491 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
L/E | 0.6588 | likely_pathogenic | 0.6512 | pathogenic | -0.545 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
L/F | 0.5341 | ambiguous | 0.4788 | ambiguous | -0.916 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.492583067 | None | None | I |
L/G | 0.8678 | likely_pathogenic | 0.8758 | pathogenic | -1.442 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
L/H | 0.6608 | likely_pathogenic | 0.6075 | pathogenic | -0.61 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
L/I | 0.1706 | likely_benign | 0.1584 | benign | -0.629 | Destabilizing | 0.999 | D | 0.45 | neutral | None | None | None | None | I |
L/K | 0.4589 | ambiguous | 0.4709 | ambiguous | -0.725 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
L/M | 0.2134 | likely_benign | 0.1896 | benign | -0.488 | Destabilizing | 1.0 | D | 0.665 | neutral | N | 0.446618703 | None | None | I |
L/N | 0.7054 | likely_pathogenic | 0.7278 | pathogenic | -0.471 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
L/P | 0.5053 | ambiguous | 0.5268 | ambiguous | -0.784 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
L/Q | 0.4294 | ambiguous | 0.3911 | ambiguous | -0.705 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
L/R | 0.4738 | ambiguous | 0.428 | ambiguous | -0.099 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
L/S | 0.7366 | likely_pathogenic | 0.7521 | pathogenic | -1.038 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.468511341 | None | None | I |
L/T | 0.4047 | ambiguous | 0.4414 | ambiguous | -0.982 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
L/V | 0.1836 | likely_benign | 0.1675 | benign | -0.784 | Destabilizing | 0.999 | D | 0.514 | neutral | N | 0.429243664 | None | None | I |
L/W | 0.7851 | likely_pathogenic | 0.7138 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.47881107 | None | None | I |
L/Y | 0.8022 | likely_pathogenic | 0.7709 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.