Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33345 | 100258;100259;100260 | chr2:178537076;178537075;178537074 | chr2:179401803;179401802;179401801 |
N2AB | 31704 | 95335;95336;95337 | chr2:178537076;178537075;178537074 | chr2:179401803;179401802;179401801 |
N2A | 30777 | 92554;92555;92556 | chr2:178537076;178537075;178537074 | chr2:179401803;179401802;179401801 |
N2B | 24280 | 73063;73064;73065 | chr2:178537076;178537075;178537074 | chr2:179401803;179401802;179401801 |
Novex-1 | 24405 | 73438;73439;73440 | chr2:178537076;178537075;178537074 | chr2:179401803;179401802;179401801 |
Novex-2 | 24472 | 73639;73640;73641 | chr2:178537076;178537075;178537074 | chr2:179401803;179401802;179401801 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1559064081 | None | 0.565 | N | 0.469 | 0.214 | 0.410868550352 | gnomAD-4.0.0 | 1.5931E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86064E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5994 | likely_pathogenic | 0.6013 | pathogenic | -0.757 | Destabilizing | 0.996 | D | 0.541 | neutral | None | None | None | None | N |
A/D | 0.6988 | likely_pathogenic | 0.7671 | pathogenic | -0.167 | Destabilizing | 0.722 | D | 0.644 | neutral | N | 0.463625597 | None | None | N |
A/E | 0.6698 | likely_pathogenic | 0.7424 | pathogenic | -0.318 | Destabilizing | 0.775 | D | 0.579 | neutral | None | None | None | None | N |
A/F | 0.6192 | likely_pathogenic | 0.6682 | pathogenic | -0.822 | Destabilizing | 0.961 | D | 0.689 | prob.neutral | None | None | None | None | N |
A/G | 0.2487 | likely_benign | 0.2466 | benign | -0.16 | Destabilizing | 0.349 | N | 0.495 | neutral | N | 0.453256674 | None | None | N |
A/H | 0.7457 | likely_pathogenic | 0.8016 | pathogenic | -0.205 | Destabilizing | 0.996 | D | 0.694 | prob.neutral | None | None | None | None | N |
A/I | 0.6813 | likely_pathogenic | 0.6943 | pathogenic | -0.307 | Destabilizing | 0.923 | D | 0.599 | neutral | None | None | None | None | N |
A/K | 0.8434 | likely_pathogenic | 0.8966 | pathogenic | -0.325 | Destabilizing | 0.775 | D | 0.585 | neutral | None | None | None | None | N |
A/L | 0.4599 | ambiguous | 0.4936 | ambiguous | -0.307 | Destabilizing | 0.633 | D | 0.545 | neutral | None | None | None | None | N |
A/M | 0.5236 | ambiguous | 0.52 | ambiguous | -0.353 | Destabilizing | 0.989 | D | 0.603 | neutral | None | None | None | None | N |
A/N | 0.4628 | ambiguous | 0.4901 | ambiguous | -0.107 | Destabilizing | 0.923 | D | 0.649 | neutral | None | None | None | None | N |
A/P | 0.8577 | likely_pathogenic | 0.9062 | pathogenic | -0.225 | Destabilizing | 0.949 | D | 0.598 | neutral | N | 0.476090675 | None | None | N |
A/Q | 0.6037 | likely_pathogenic | 0.6608 | pathogenic | -0.359 | Destabilizing | 0.961 | D | 0.62 | neutral | None | None | None | None | N |
A/R | 0.737 | likely_pathogenic | 0.8265 | pathogenic | 0.046 | Stabilizing | 0.923 | D | 0.628 | neutral | None | None | None | None | N |
A/S | 0.0997 | likely_benign | 0.0946 | benign | -0.322 | Destabilizing | 0.014 | N | 0.189 | neutral | N | 0.401171628 | None | None | N |
A/T | 0.1719 | likely_benign | 0.1619 | benign | -0.393 | Destabilizing | 0.008 | N | 0.337 | neutral | N | 0.407214953 | None | None | N |
A/V | 0.3796 | ambiguous | 0.3754 | ambiguous | -0.225 | Destabilizing | 0.565 | D | 0.469 | neutral | N | 0.453795392 | None | None | N |
A/W | 0.9146 | likely_pathogenic | 0.9465 | pathogenic | -0.936 | Destabilizing | 0.996 | D | 0.759 | deleterious | None | None | None | None | N |
A/Y | 0.7527 | likely_pathogenic | 0.8062 | pathogenic | -0.585 | Destabilizing | 0.987 | D | 0.691 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.